TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTTTAGCTGTCTTCAAGCCTAACAAGAGATTGATTTTTGCCTTTCAACTT
GGACTTTGACCAACACTTATACTTTGACTGTTTTGATCTTCTGGCCTTCG
GAGTAGGTCTGCTCGAAGTTCCAGCTTGCTGGCTATAAATGGCAAGGCTT
CTTGCAGTCTACAGCTGTCTGACTATGTGTCATGACAGCATGTGTTTATA
GAAGTGAAGATACTTGTAAAATATTTCCTGTTGTTGTTTTTTCAGCTTAA
TGCAGAAGCTAAAATGGAAGACATGCTCACAGGTGCCTTTCTTATTGTAA
TTCCTCCTATATATTAACCACCGCCCCCCATGGGCAGTTTTGTGGCCTTA
GTTTTATGCATTATCACCCACCGCAATAGCTGTGCAGTCATTTTAGGGAC
TGGACAATGATCCTGTCTCCTCCAGGCCTTCAACCACTTTCAGCGAGTCC
AATACTGGAGCTGGGGAGAATAATTCTTAAGTATTCTCCATCCCACACAG
AAGAAGACAGCTGCCCACAGGATTCCCAGAATGGACACTCTACCTGCAGA
TCACTCAGCCTTAGTTGTATGTTTTGCCATCCATAGGATAATGTATGTAT
CCAGCACCATAGCACAAAGCATATATTGCCATGTATGGTAGTTTAGTCAT
GCTGGAATGCCCCTATGCATCTC

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCTCAGGATTTTCTCAAAGTGCTGCTCTGC
TTTTCCACGGTGGTGTGCACAAAGGTCTGCCCCAATATTCTTGCCTTGCT
GGTTGGCTTTGCACAGAAGCAGGTTTTTAAATGCACTAGGGGAAAGCAGC
TTTTACTAAATGTTTTATAACGTGTCAGAAAACCTTTATCGAACATTTAA
TCCAAAACCTGGCTTTGAACCAGGGAGGCATACAATTCAGTAATTAATTT
TTTTTTACCTTCTTTTGCTAATCGCTGATAAAAAGCTTAATTCTATTAAG
AACTCGACTTGACAAATCGCACCGCCCAACGGAAGCGTTTAGAAATTAAT
TACGCATTTTATTGCACCCACATCAGATAAACAGGGAAAGACCAGGCAGA
CAAAGCAAAAATGCGGGCCTGGAAGAAGAAAAGCGGTCAAATAGAAACAA
CCTATTGGTGTCTAACTATTTCCATTATGACTCAATGTGTCACCTGAAGA
TTATCCATATAAACACCGCGTGATTTCAGATAATATCCTGTCCTCATCAG
GCGCAGTTTTGCTTCTGGACTATGTTAACAATGCCCTTTTCCGTTTTCTC
CTTTGGAAGCATACATTTTCCCCCTTAGAAGCCCAAGCTGATTTGTATTC
CCTGCAAAGCTTCTTTGTCTAATTG

Query= MSMg01no213_p04.b1 MSMg01no213_p04.b1 CHROMAT_FILE:
MSMg01no213_p04.b1 PHD_FILE: MSMg01no213_p04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:07 2005
         (318 letters)



>mm_chr16_41875507_41876224
          Length = 718

 Score =  584 bits (302), Expect = e-171
 Identities = 311/314 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctttagctgtcttcaagcctaacaagagattgatttttgcctttcaacttggact 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gaattctttagctgtcttcaagcctaacaagagattgatttttgcctttcaacttggact 459

                                                                       
Query: 65  ttgaccaacacttatactttgactgttttgatcttctggccttcggagtaggtctgctcg 124
           ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 ttggccaacacttacactttgactgttttgatcttctggccttcggagtaggtctgctcg 399

                                                                       
Query: 125 aagttccagcttgctggctataaatggcaaggcttcttgcagtctacagctgtctgacta 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 aagttccagcttgctggctataaatggcaaggcttcttgcagtctacagctgtctgacta 339

                                                                       
Query: 185 tgtgtcatgacagcatgtgtttatagaagtgaagatacttgtaaaatatttcctgttgtt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tgtgtcatgacagcatgtgtttatagaagtgaagatacttgtaaaatatttcctgttgtt 279

                                                                       
Query: 245 gttttttcagcttaatgcagaagctaaaatggaagacatgctcacaggtgcctttcttat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 gttttttcagcttaatgcagaagctaaaatggaagacatgctcacaggtgcctttcttat 219

                         
Query: 305 tgtaattcctccta 318
           |||||||| |||||
Sbjct: 218 tgtaattcatccta 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space:   219081
Effective search space used:   219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no213_p04.g1 MSMg01no213_p04.g1 CHROMAT_FILE:
MSMg01no213_p04.g1 PHD_FILE: MSMg01no213_p04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:07 2005
         (288 letters)



>mm_chr16_41721084_41721771
          Length = 688

 Score =  557 bits (288), Expect = e-163
 Identities = 288/288 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctcaggattttctcaaagtgctgctctgcttttccacggtggtgtgcacaaaggtctgcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcaggattttctcaaagtgctgctctgcttttccacggtggtgtgcacaaaggtctgcc 260

                                                                       
Query: 61  ccaatattcttgccttgctggttggctttgcacagaagcaggtttttaaatgcactaggg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccaatattcttgccttgctggttggctttgcacagaagcaggtttttaaatgcactaggg 320

                                                                       
Query: 121 gaaagcagcttttactaaatgttttataacgtgtcagaaaacctttatcgaacatttaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaagcagcttttactaaatgttttataacgtgtcagaaaacctttatcgaacatttaat 380

                                                                       
Query: 181 ccaaaacctggctttgaaccagggaggcatacaattcagtaattaatttttttttacctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccaaaacctggctttgaaccagggaggcatacaattcagtaattaatttttttttacctt 440

                                                           
Query: 241 cttttgctaatcgctgataaaaagcttaattctattaagaactcgact 288
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttttgctaatcgctgataaaaagcttaattctattaagaactcgact 488


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space:   189441
Effective search space used:   189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)