Query= MSMg01no233_c10.b1 MSMg01no233_c10.b1 CHROMAT_FILE:
MSMg01no233_c10.b1 PHD_FILE: MSMg01no233_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:49 2005
(313 letters)
>mm_chr16_49064759_49065471
Length = 713
Score = 565 bits (292), Expect = e-165
Identities = 304/312 (97%), Gaps = 8/312 (2%)
Strand = Plus / Plus
Query: 5 gaattcatagaaactcctcttgcctctgcctctgcagtatgggattaaaggtgtgtgcta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatagaaactcctcttgcctctgcctctgcagtatgggattaaaggtgtgtgcta 264
Query: 65 caatatactgttaagaacataccctttctttttctatttttttcagattatgagaattaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caatatactgttaagaacataccctttctttttctatttttttcagattatgagaattaa 324
Query: 125 ggaggacaaacttcaacagatgaaccctgaagagcttgaaatgatagaagatctgtcaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggaggacaaacttcaacagatgaaccctgaagagcttgaaatgatagaagatctgtcaat 384
Query: 185 gctgctttacctcaatgaagcatctgtactgcacaccctgaggaggcgatatgaccattg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gctgctttacctcaatgaagcatctgtactgcacaccctgaggaggcgatatgaccattg 444
Query: 245 gatgatctatgtatgtatatagactttacctttta----aaaaaaatctcaggttggaac 300
|||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 445 gatgatctatgtatgtatatagactttacc----aggaaaaaaaaatctcaggttggaac 500
Query: 301 ttgtattaactg 312
||||||||||||
Sbjct: 501 ttgtattaactg 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no233_c10.g1 MSMg01no233_c10.g1 CHROMAT_FILE:
MSMg01no233_c10.g1 PHD_FILE: MSMg01no233_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:49 2005
(286 letters)
>mm_chr16_49196874_49197560
Length = 687
Score = 484 bits (250), Expect = e-141
Identities = 277/286 (96%), Gaps = 3/286 (1%)
Strand = Plus / Minus
Query: 1 actccgaattccaaggtccctttgtacttttgaaatcccctttgcactgtgaattgctca 60
||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 485 actccaaattccaaggtccctttgtacttttgaaatcccctttgctccgtgaattgctca 426
Query: 61 gtattctgcactaataagttaaaggtccaaggctcaaagcttacaagttagcctggcatg 120
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 425 gtattctgcactaataagttaaaggtccaacgctcagagcttacaagttagcctggcatg 366
Query: 121 aagggcttaaaaaaa-a-aaatctagaatgcttttccatttcaagcgtttatcaattcca 178
||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 365 aagggcttaaaaaaatataaatctagaatgcttttccacttcaagcgtttatcaattcca 306
Query: 179 tactccctggacacgtagaatttaataagtgggggaagaactttatttgagcttgtttgg 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tactccctggacacgtagaatttaataagtgggggaagaactttatttgagcttgtttgg 246
Query: 239 ctatttaaaaaaaaaagatttaaagagaaaagcaagacattccttg 284
||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 cta-ttaaaaaaaaaagatttaaagagaaaagcaagacattccttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 687
Length adjustment: 9
Effective length of query: 277
Effective length of database: 678
Effective search space: 187806
Effective search space used: 187806
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
