CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCACTGTGGGCTGGAATCTGGCAGGTCAGAGCTGAGGGAGGAAAAGCA
ATTTGAAAGTAATACTCGCTCTTAAAATGACAAGCTCTGCAGGTTTTTGT
TCTCTTCTGTGCTCCAATTAAATTGTTGAGGATTTTGAAAATTAGTCGAG
ACATTTCAACTTGCCAAATGGTAGGAACTATTGTTTTTAAAAAAAAAATT
AAAGGAAATGAAATGAGCTACAGTTTTAAAGGTCATTTCTTCTTTAAATA
AGCTCCCCCCATTTTTATCAGCCACTAAATATATGGAATTCACATGTATT
TGCNTTTTATTCCGAGNTCTGTNCCGCAGAGAACTGAACCCATCACCTCA
TCTACTCCATGTTAAAAAAAACAAAGGGCACAGGTTAAAAATGGCCATTG
GGTCATCTTCATGACATAAGCAAGCTAGGTCATTTCCCCACACCTCACAC
ATTTTATAGGGAGGAAACAAAACCAAAATGAGTCCAGGCTCGCCTGATTA
TGGCCGTGGAGATTTTCCCCTCCATGACCTCCAGACCCTCCTGTGATATA
GTTACTTTCCGGCCTCGGATAGTCTGTTCTCTTCAGAGCCTAGCCTGTTC
CTACTCCACTGCCATTCCAAATTCACCATGGAAAGTGACATCACTGCACN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATAGTAACTAAGTGTGGGGATAGA
AGGCAGTGCAAAAACTGGGTCTAAGTAAATGGGGAAAAATTGTATATAGA
TCTTCTATGAATAAGTTTCCCTTCTGTAGTGTAAGTGAGTCTAGCAAAGG
GGACAGAGGCTTGAATGAAGCAGAGAATAGTAAAGAGCCCGGATAAATGG
CATTTCCATGGGTAGAGACAACAGAATACTGTATAGTTCTGAGAATCCTC
TATGAAAAAACAAGGACCTGCCATCTGTTCCTTCAAAATCCCTAATTGTG
ACCAATCTTTTCGATTCGCCCCCCCCTGGAAAGCCCAGTCTATCTAAAAG
AAGCTAAGAGAGCCTGACACCCGTTGTTCAGCAGCCCACGTTCATGTTCA
GTGCAACAGCCTGACAGCAGGGACTTTACCATAGGGATTTACAACAGTTA
TCACCGTGATAGTGCATCCTGAGGTCCCCAACCTGACAGTGAAAGGAGAA
GACATTTGGTGTTATCTTCTTTCTTGTGACATAGGAACATCCCAGCTTGC
TCTAGGGACAAGAGAGTGGCTATAATAACTGCATTTCACATTTAGACAGC
TTTCCACTCACTTACATTTTATTAGTAGTTCATAAGTCTCCTCTGATGTA
CTTAGN

Query= MSMg01no235_k14.b1 MSMg01no235_k14.b1 CHROMAT_FILE:
MSMg01no235_k14.b1 PHD_FILE: MSMg01no235_k14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:02 2005
         (273 letters)



>mm_chr16_26043223_26043895
          Length = 673

 Score =  464 bits (240), Expect = e-135
 Identities = 264/272 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   gcacaggttaaaaatggccattgggtcatcttcatgacataagcaagctaggtcatttcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gcacaggttaaaaatggccattgggtcatcttcatgacataagcaagctaggtcatttcc 413

                                                                       
Query: 61  ccacacctcacacattttatagggaggaaacaaaaccaaaatgagtccaggctcgcctga 120
           ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 412 ccacacctcacacattttatagggaggaaacaaaaccaaaacgaatccaggctcgcctga 353

                                                                       
Query: 121 ttatggccgtggagattttcccctccatgacctccagaccctcctgtgatatagttactt 180
           |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 352 ttatggccatggagattttcccctccgtgacctccagaccctcctgtgatatagttactt 293

                                                                       
Query: 181 tccggcctcggatagtctgttctcttcagagcctagcctgttcctactccactgccattc 240
            || ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 292 cccagccacggatagtctgttctcttcagagactagcctgttcctactccactgccattc 233

                                           
Query: 241 caaattcaccatggaaagtgacatcactgcac 272
           ||||||||||||||||||||||||||||||||
Sbjct: 232 caaattcaccatggaaagtgacatcactgcac 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 273
Length of database: 673
Length adjustment: 9
Effective length of query: 264
Effective length of database: 664
Effective search space:   175296
Effective search space used:   175296
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no235_k14.g1 MSMg01no235_k14.g1 CHROMAT_FILE:
MSMg01no235_k14.g1 PHD_FILE: MSMg01no235_k14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:03 2005
         (282 letters)



>mm_chr16_25883155_25883836
          Length = 682

 Score =  524 bits (271), Expect = e-153
 Identities = 277/279 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atagtaactaagtgtggggatagaaggcagtgcaaaaactgggtctaagtaaatggggaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atagtaactaagtgtggggatagaaggcagtgcaaaaactgggtctaagtaaatggggaa 260

                                                                       
Query: 61  aaattgtatatagatcttctatgaataagtttcccttctgtagtgtaagtgagtctagca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaattgtatatagatcttctatgaataagtttcccttctgtagtgtaagtgagtctagca 320

                                                                       
Query: 121 aaggggacagaggcttgaatgaagcagagaatagtaaagagcccggataaatggcatttc 180
           |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 321 aaggggacagaggcttgaatgaagcagagaatagtaaagagcccagataaatggtatttc 380

                                                                       
Query: 181 catgggtagagacaacagaatactgtatagttctgagaatcctctatgaaaaaacaagga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catgggtagagacaacagaatactgtatagttctgagaatcctctatgaaaaaacaagga 440

                                                  
Query: 241 cctgccatctgttccttcaaaatccctaattgtgaccaa 279
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctgccatctgttccttcaaaatccctaattgtgaccaa 479


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space:   183729
Effective search space used:   183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)