Query= MSMg01no263_l08.b1 MSMg01no263_l08.b1 CHROMAT_FILE:
MSMg01no263_l08.b1 PHD_FILE: MSMg01no263_l08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:42 2005
(294 letters)
>mm_chr16_37267223_37267916
Length = 694
Score = 518 bits (268), Expect = e-151
Identities = 286/292 (97%)
Strand = Plus / Minus
Query: 1 tccttgaacagtgtagtgcatagggtggttaatggcaggtagactgcctggctctgggag 60
||||||| ||||||||||| |||||||||||||||||||||| |||||||| ||||||||
Sbjct: 492 tccttgagcagtgtagtgcgtagggtggttaatggcaggtaggctgcctggttctgggag 433
Query: 61 ttcttacctggaattccatgtaaggacctcactggatctcaaccataatgggttaagtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ttcttacctggaattccatgtaaggacctcactggatctcaaccataatgggttaagtga 373
Query: 121 tcaatcaatatatgatattttgtttatttctttcaaacttttaaaaacaatttttgtgtg 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 372 tcaatcaatatatgatattttgtttatttctttcaaacttttacaaacaatttttgtgtg 313
Query: 181 tgctttaattacttagaagttttgtttccaaagtatttttgtcagtgagctttgatttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tgctttaattacttagaagttttgtttccaaagtatttttgtcagtgagctttgatttta 253
Query: 241 cttcactataatgcctacaattttaattgtttggaatttaatatttattttt 292
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tttcactataatgcctacaattttaattgtttggaatttaatatttattttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no263_l08.g1 MSMg01no263_l08.g1 CHROMAT_FILE:
MSMg01no263_l08.g1 PHD_FILE: MSMg01no263_l08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:42 2005
(579 letters)
>mm_chr16_37116465_37117443
Length = 979
Score = 1077 bits (557), Expect = 0.0
Identities = 573/579 (98%), Gaps = 2/579 (0%)
Strand = Plus / Plus
Query: 1 aatctttctatctaccatgtgcaccccaggatttgaactcagattgtaagtttgatggta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 aatctttctatctaccatgtgcaccccaggatttgaactcagattgtaagtttgatggta 262
Query: 61 agtgcctctactggctgagccatcttgggagctacatctttttttttttttttttttggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 263 agtgcctctactggctgagccatcttgggagctacatcttttttttttttttttt--ggc 320
Query: 121 agggtctctcacttggcctggcacttgcaagtcagctaggctaactagccattgaacccc 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 agggtctctcacttggcctggcacttgcaagtcagctaggctaactagtcattgaacccc 380
Query: 181 agtgatctgcttatctgtactttcccatcattaagatcacaagcacatgctacctcgcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtgatctgcttatctgtactttcccatcattaagatcacaagcacatgctacctcgcct 440
Query: 241 agctttcttatgtgaatgctgggaattgaactcaattcctaatatgcacaaagcaagcac 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agctttcttatgtgcatgctgggaattgaactcaattcctaatatgcacaaagcaagcac 500
Query: 301 tttactgacacacctctctagccctacaattgcacttatcaacataaaggaattggaatt 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 501 tttactgacacacctctctagccctacaattgcacttattaacataaaggaattggaatt 560
Query: 361 ctcaaatacataaaacctcatgtttgacaatgtatgtttcaatctgaggctgcccaatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctcaaatacataaaacctcatgtttgacaatgtatgtttcaatctgaggctgcccaatat 620
Query: 421 tctctgttaatctttctatagacgcatttgtaaggtccctgcttttctgtgaatactaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctctgttaatctttctatagacgcatttgtaaggtccctgcttttctgtgaatactaga 680
Query: 481 taattttaggcataggattagattatataaataaaggttttaaatttgtggtttttataa 540
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tatttttaggcataggattagattatataaataaaggttttaaatttgtggtttttataa 740
Query: 541 tatactaaaagttttcttgttaggaacagagctctgctt 579
|||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tatactaaaagttttcttgttaggaacagagctctgctt 779
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space: 551361
Effective search space used: 551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
