Query= MSMg01no265_j15.b1 MSMg01no265_j15.b1 CHROMAT_FILE:
MSMg01no265_j15.b1 PHD_FILE: MSMg01no265_j15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:08 2005
(302 letters)
>mm_chr16_90103897_90104599
Length = 703
Score = 538 bits (278), Expect = e-157
Identities = 296/302 (98%), Gaps = 1/302 (0%)
Strand = Plus / Plus
Query: 2 gaattcagatgggccctcttcca-caactggtgtcatcacggacagggaaactggccaga 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 202 gaattcagatgggccctcttccaacaactggtgtcatcacggacagggaaactggccaga 261
Query: 61 ggcagaccctgggaagggcatgcaaagatggaggcaaagccacagcccctgaaagccagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ggcagaccctgggaagggcatgcaaagatggaggcaaagccacagcccctgaaagccagg 321
Query: 121 agatggcagggaggcaagaaagagaggcccagcaggcggagggcacaagtcctgcccagg 180
||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 322 tgatggcagggaggcaagaaggagaggcccagcaggcggagggcaggagtcctgcccagg 381
Query: 181 gctttagaggggtgtagctctgcagatagctcaatctcagccttctgaactatgaaatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gctttagaggggtgtagctctgcagatagctcaatctcagccttctgaactatgaaatca 441
Query: 241 atttctatcctttgaaacctgtcccatctgtggtacttcattagcacagccctaaggacc 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 442 atttctatcctttgaaacctgtcccatctgtggcacttcattagcacagccctaaggacc 501
Query: 301 ta 302
||
Sbjct: 502 ta 503
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 302
Length of database: 703
Length adjustment: 9
Effective length of query: 293
Effective length of database: 694
Effective search space: 203342
Effective search space used: 203342
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no265_j15.g1 MSMg01no265_j15.g1 CHROMAT_FILE:
MSMg01no265_j15.g1 PHD_FILE: MSMg01no265_j15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:08 2005
(248 letters)
>mm_chr16_90252856_90253503
Length = 648
Score = 468 bits (242), Expect = e-136
Identities = 245/246 (99%)
Strand = Plus / Minus
Query: 1 aaaaggcttgcaagacaggcagcttacctgccaacccatgaacttacagattatacgggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 446 aaaaggcttgcaagacaggcagcttacctgccaacccatgaacttacagattatatgggt 387
Query: 61 taggttttttgttgtttgttttaagaaaagtttgggaaaatttgtatgagctgtgaagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 taggttttttgttgtttgttttaagaaaagtttgggaaaatttgtatgagctgtgaagtt 327
Query: 121 ttaagaaagaaattttatagtaaaactgctgaaatgactgttggccctgtcctaccccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ttaagaaagaaattttatagtaaaactgctgaaatgactgttggccctgtcctaccccat 267
Query: 181 atatttttttctttgattatattagtatattctcgactgggcagcacatgggcatatgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 atatttttttctttgattatattagtatattctcgactgggcagcacatgggcatatgtg 207
Query: 241 tttata 246
||||||
Sbjct: 206 tttata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
