Query= MSMg01no265_o20.b1 MSMg01no265_o20.b1 CHROMAT_FILE:
MSMg01no265_o20.b1 PHD_FILE: MSMg01no265_o20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:34 2005
(316 letters)
>mm_chr16_73828753_73829468
Length = 716
Score = 590 bits (305), Expect = e-173
Identities = 311/313 (99%), Gaps = 1/313 (0%)
Strand = Plus / Minus
Query: 5 gaattctccaccacattgctgcccatcccctgcacccccccccc-aaaaaaaatcttggg 63
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 696 gaattctccaccacattgctgcccatcccctgcaccccccccccaaaaaaaaatcttggg 637
Query: 64 tgaagactatcaactttccactttaagtatttatttcaggttaatgagcttgggtatagc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 tgaagactatcaactttccactttaagtatttatttcaggttaatgagcttgggtatagc 577
Query: 124 tcagtagtagaatgcttgcttcacttgttcaaagtcataagctccatctagaacatcgca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tcagtagtagaatgcttgcttcacttgttcaaagtcataagctccatctagaacatcgca 517
Query: 184 cacatacaaaatccaaacttcttactttttaaggatgttgtttggctatcaataaatcca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 cacatacaaaatccaaacttcttactttttaaggatgttgtttggctatcaataaatcca 457
Query: 244 tatctgtgtaagtaagcagaattatttatctccattccaatctagtgctctggtttccct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tatctgtgtaagtaagcagaattatttatctccattccaatctagtgctctggtttccct 397
Query: 304 cctgaatgatagg 316
| |||||||||||
Sbjct: 396 cttgaatgatagg 384
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no265_o20.g1 MSMg01no265_o20.g1 CHROMAT_FILE:
MSMg01no265_o20.g1 PHD_FILE: MSMg01no265_o20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:35 2005
(607 letters)
>mm_chr16_73727880_73728886
Length = 1007
Score = 1127 bits (583), Expect = 0.0
Identities = 601/607 (99%)
Strand = Plus / Plus
Query: 1 tcagcaccttgtcaggcaactctcatttgtgggtatctccagctctagaagcaacaaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcagcaccttgtcaggcaactctcatttgtgggtatctccagctctagaagcaacaaagc 260
Query: 61 tttcctttggcttctgcagacatccaccctcatgtgcacacttccatatataaattaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttcctttggcttctgcagacatccaccctcatgtgcacacttccatatataaattaagt 320
Query: 121 taattaaaattatatgtatataaagaaaacaaccatgttccaggagtggaatgagaagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taattaaaattatatgtatataaagaaaacaaccatgttccaggagtggaatgagaagca 380
Query: 181 gcatccaagagtagaatagaatgaaatgagcaaggattatgaagggaaaacattatttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcatccaagagtagaatagaatgaaatgagcaaggattatgaagggaaaacattatttcc 440
Query: 241 ccaaatctgttagatttccgaaatgatgagcagagaaaagctgttcttatagttcttgtg 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccaactctgttagatttccgaaatgatgagcagagaaaagctgttcttatagttcttgtg 500
Query: 301 cgccttttaaaattctcttgaatgtaatcagtagccttggaacacgtggcatttcttggt 360
| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 501 tgtcttttaaaattctcttgaatgtaatcagtagccttggaagatgtggcatttcttggt 560
Query: 361 ttcatgggatgggacttatttttaataaactctggcttacaacatcttcatatgttctca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttcatgggatgggacttatttttaataaactctggcttacaacatcttcatatgttctca 620
Query: 421 tagcatatcatatgcagaatcaataaaaatgagttcacccaaatttttaatgttgttcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tagcatatcatatgcagaatcaataaaaatgagttcacccaaatttttaatgttgttcag 680
Query: 481 gcaatttatttgctactaaaattgtaaaagtcaatacagaaactggagaaatggagtcat 540
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 681 gcaatttatttgctactaaaattgtaaaagtcaatacagaaactgaagaaatggagtcat 740
Query: 541 gttatcttaataactctttcagtatgaggagaatacgtataatgaagaacacatgttgac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gttatcttaataactctttcagtatgaggagaatacgtataatgaagaacacatgttgac 800
Query: 601 tggatgg 607
|||||||
Sbjct: 801 tggatgg 807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space: 595209
Effective search space used: 595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
