XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTGGTTCTATACGCACCTAATCATGATTTTAATTTAAGCAAACATGAAT
AAATGCGGGCCAAGAAAGGGACTTTGAGGGTTTGGTGATAAGTACTTAGG
CCTAAATATCAATCTCGGAAGTAGTTATTCTTATGGGCATGGCAAAAATA
TTTTAACCTAATGGAAATGTTTCCAAATCTGATTGTAACTCAGCTACATC
ATGGCCTCTGTGATAGCTTTGAACACGTAACTGGTGTCAGATGATGCCCT
GTTTCCTCATTTTGAAACCAAGCCTTTTAATGCTTACATTGTCTACCAGA
TTGTGTTAAGGACTATAGACAATACATCTTCTGGTCTAGAGGTGCACTTC
AATAGTAATGAAGGTTGAAAGGTTCTACAGTTGTGTAGTAATTTCACAAT
CAAGTGATTATTTTTTGGATGATGATCTATTATACAGAAATGTGTAGATA
AAGCAATGACTGGGCATTAGGTAACATCTGTTCTGAAGATCCATTAGTAT
AAATAGATTAGTTTATTAGTAATTCACTGTATCACATAGAAATTCTATAT
TTTGATACAGCATGTTTGTGTGTCTGTCTGTCTGTCTGTTAGTGCTTGTT
TGTACTTTATAAGAGTGATCAAAGTAACCATTTGACATGGTCACACATCC
TAGCTATATTCAGACATTAAATGGGTTGCCTGAGATCCTGGC

TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXACTTTGAAAATGACTGCTGAACAGTGAAC
TTGAAACTTTTAAACTTGTAGGGGTGAGGAAGGGAACAAGGAGAATTATA
ATTAGCAAGTCCAGAGTTATTGCCTGGCAGATGTTGTATATCAATGGATG
CTCTGTCAGGAGCTCTCAGGTAAGAGTCAAGGACTACTTTCCCCTCCAAA
GCTAGATTTCTGCAACTTCTAAAGAGAGGTCTGCAAGTCCGTATGTCTGG
GACACAACTCAGAACCTCTGCCAATTGTTTCCCAGACCTCAGATCTGCCT
GAAACCATGGTGTTTACCGCTCCCCCCCCCGCAATAGGAACTCTCAGGCC
ATCAAGGCAATGGGAAGGAAACCATCACTTTTATTTTTATTTTTATTTTT
TATTTTTGACTAAGACTTTGGTAAGACTTTGGTTAGAGATCTAAATTCCA
GGTCATTTCTCAATGTAACTTTGGTGACAGAAAACTGGTTGAACCCAAGG
CAAAATTAACAGGAACCATCTTTGATGGCTCCACATCACAACAGATTGAA
CATTCTCAAGTTGTCACTTAGATGAAGATACTAGTGATGAAAATGAAGAT
TTTGAAACCTATGGAGACTAAGGGTCAGTCCCAAGGTAAATTTGTAGATA
GCATTTCTGAGATAGGTGCCTGGGATTTCTAGGTGAATA

Query= MSMg01no272_d12.b1 MSMg01no272_d12.b1 CHROMAT_FILE:
MSMg01no272_d12.b1 PHD_FILE: MSMg01no272_d12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:19 2005
         (633 letters)



>mm_chr16_41890327_41891359
          Length = 1033

 Score = 1147 bits (593), Expect = 0.0
 Identities = 620/629 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   acctaatcatgattttaatttaagcaaacatgaataaatgcgggccaagaaagggacttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 acctaatcatgattttaatttaagcaaacatgaataaatgcgggccaagaaagggacttt 688

                                                                       
Query: 61  gagggtttggtgataagtacttaggcctaaatatcaatctcggaagtagttattcttatg 120
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 687 gagggtttggtgataagtacttaggcctaaatataaatctcggaagtagttattcttatg 628

                                                                       
Query: 121 ggcatggcaaaaatattttaacctaatggaaatgtttccaaatctgattgtaactcagct 180
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gtcatggcaaaaatattttaacctaatggaaatgtttccaaatctgattgtaactcagct 568

                                                                       
Query: 181 acatcatggcctctgtgatagctttgaacacgtaactggtgtcagatgatgccctgtttc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 acatcatggcctctgtgatagctttgaacacgtaactggtgtcagatgatgccctgtttc 508

                                                                       
Query: 241 ctcattttgaaaccaagccttttaatgcttacattgtctaccagattgtgttaaggacta 300
           ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 507 ctcattttgaaaccaagccttttaatgctcagattgtctaccagattgtgttaaggacta 448

                                                                       
Query: 301 tagacaatacatcttctggtctagaggtgcacttcaatagtaatgaaggttgaaaggttc 360
           ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 447 tagacaatacatcctctggtctagaggtgcatttcaatagtaatgaaggttgaaaggttc 388

                                                                       
Query: 361 tacagttgtgtagtaatttcacaatcaagtgattattttttggatgatgatctattatac 420
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 387 tacagttgtgtagtaatttcacaatcaagtgattattttttggacgatgatctattatac 328

                                                                       
Query: 421 agaaatgtgtagataaagcaatgactgggcattaggtaacatctgttctgaagatccatt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 agaaatgtgtagataaagcaatgactgggcattaggtaacatctgttctgaagatccatt 268

                                                                       
Query: 481 agtataaatagattagtttattagtaattcactgtatcacatagaaattctatattttga 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 agtataaatagattagtttattagtaattcactgtatcacatagaaattctatattttga 208

                                                                       
Query: 541 tacagcatgtttgtgtgtctgtctgtctgtctgttagtgcttgtttgtactttataagag 600
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gacagcatgtttgtgtgtctgtctgtctgtctgttagtgcttgtttgtactttataagag 148

                                        
Query: 601 tgatcaaagtaaccatttgacatggtcac 629
           ||| |||||||||||||||||||||||||
Sbjct: 147 tgagcaaagtaaccatttgacatggtcac 119


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space:   637329
Effective search space used:   637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no272_d12.g1 MSMg01no272_d12.g1 CHROMAT_FILE:
MSMg01no272_d12.g1 PHD_FILE: MSMg01no272_d12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:19 2005
         (291 letters)



>mm_chr16_41683192_41683882
          Length = 691

 Score =  563 bits (291), Expect = e-165
 Identities = 291/291 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   actttgaaaatgactgctgaacagtgaacttgaaacttttaaacttgtaggggtgaggaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actttgaaaatgactgctgaacagtgaacttgaaacttttaaacttgtaggggtgaggaa 260

                                                                       
Query: 61  gggaacaaggagaattataattagcaagtccagagttattgcctggcagatgttgtatat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggaacaaggagaattataattagcaagtccagagttattgcctggcagatgttgtatat 320

                                                                       
Query: 121 caatggatgctctgtcaggagctctcaggtaagagtcaaggactactttcccctccaaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caatggatgctctgtcaggagctctcaggtaagagtcaaggactactttcccctccaaag 380

                                                                       
Query: 181 ctagatttctgcaacttctaaagagaggtctgcaagtccgtatgtctgggacacaactca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctagatttctgcaacttctaaagagaggtctgcaagtccgtatgtctgggacacaactca 440

                                                              
Query: 241 gaacctctgccaattgtttcccagacctcagatctgcctgaaaccatggtg 291
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaacctctgccaattgtttcccagacctcagatctgcctgaaaccatggtg 491


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space:   192324
Effective search space used:   192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)