Query= MSMg01no275_a15.b1 MSMg01no275_a15.b1 CHROMAT_FILE:
MSMg01no275_a15.b1 PHD_FILE: MSMg01no275_a15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:42 2005
(702 letters)
>mm_chr16_10867924_10869025
Length = 1102
Score = 1305 bits (675), Expect = 0.0
Identities = 693/699 (99%)
Strand = Plus / Plus
Query: 4 ggaattcaaccaagatttcgggtcaagtttcccacacccaagaggcaccatgctgccacc 63
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaaccaagagttagggtcaagtttcccacacccaagaggcaccatgctgccacc 263
Query: 64 tgctgggcaagaagggacctgtaggcgctcttgccggctcctacctgtgaggccttcgct 123
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgctgggcaagaagggaactgtaggcgctcttgccggctcctacctgtgaggccttcgct 323
Query: 124 gcccacgtctccatggttaatcccttctcatctaacagcacagaacggcatgagaaaagt 183
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 324 gcccacgtctccatggttaatcccttctcatctaacagcacagaacagcatgagaaaagt 383
Query: 184 cctgtggttcaggccgctacagttctgcttacactgcactgtttagccacgcacagaagc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cctgtggttcaggccgctacagttctgcttacactgcactgtttagccacgcacagaagc 443
Query: 244 ccctgtggtttgccccttgtctatagaggggcctctgtccttccggctgttgaggccaaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ccctgtggtttgccccttgtctatagaggggcctctgtccttccggctgttgaggccaaa 503
Query: 304 tactttgaaatcacctctcactcctcttttaccaccgccatccagctgagtcctgatcct 363
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 504 tactttgaaatcacctctcactcctcttttaccaccgccatccaggtgagtcctgatcct 563
Query: 364 ctccaggctgacctaaaagcacatctggattctgactgcctctcatcccttccacactga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctccaggctgacctaaaagcacatctggattctgactgcctctcatcccttccacactga 623
Query: 424 gtttgctccagcaaccccagccagccctatactctgtgcagggacactgggatgggcctt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gtttgctccagcaaccccagccagccctatactctgtgcagggacactgggatgggcctt 683
Query: 484 agctgccaacttccaggcaacctgaacagccaggcccctcaccatgggggccagtgggaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 agctgccaacttccaggcaacctgaacagccaggcccctcaccatgggggccagtgggaa 743
Query: 544 tacacagagatccaccttcccctgggccaaaccccttgtatgcgcccatctccaagcaga 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tacacagagatccaccttcccctgggccaaaccccttgtatgcgcccatctccaagcaga 803
Query: 604 agccaaggccttaaaccacctggaacgtgctcaaatcctgctggcttccttactactttt 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 agccaaggccttaaaccacctggaacgtgctcaaatcctgctggcttccttactactttt 863
Query: 664 cagaccggtaccacggctctgcaacctcccaagccctgc 702
|||||||||||||||||||||||||||||||| ||||||
Sbjct: 864 cagaccggtaccacggctctgcaacctcccaaaccctgc 902
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 702
Length of database: 1102
Length adjustment: 10
Effective length of query: 692
Effective length of database: 1092
Effective search space: 755664
Effective search space used: 755664
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no275_a15.g1 MSMg01no275_a15.g1 CHROMAT_FILE:
MSMg01no275_a15.g1 PHD_FILE: MSMg01no275_a15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:42 2005
(365 letters)
>mm_chr16_11011228_11011992
Length = 765
Score = 648 bits (335), Expect = 0.0
Identities = 360/373 (96%), Gaps = 8/373 (2%)
Strand = Plus / Minus
Query: 1 tctttctttaatctgtactattgcttagttccaaataaaattgtcttgctgttttgcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 tctttctttaatctgtactattgcttagttccaaataaaattgtcttgctgttttgcaaa 656
Query: 61 gatgaatagatagccaattgcttttcagggtggcacagccagctccccagtccatctcca 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 655 gatgaatagatagccaattgcttttcagggtggcacagctagctccccagtccatctcca 596
Query: 121 ggatgctctatctcacaaagga--------ccttttagttgctcccttctggtgcctggg 172
|||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 595 ggatgctctatctcacaaaggataccgggtccttttagttgctcccttctggtgcctggg 536
Query: 173 gtttctgtgagtggcaggacagggagagttctgggtcgagaaacctggaggggccactgt 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 535 gtttctgtgagtggcaggacagggagagttctgggtcgagaaacctggaggggccaccgt 476
Query: 233 gtagtgacattggctgtggcttcagctggagtttccctgctcagggccaccagtgctgtg 292
||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 475 gtagtgacattggctgtggcttcagctggaggctccctgctcagggccagcagtgctgtg 416
Query: 293 tcagtcccctgtcttcagctggcccaggcttttgcttctggaggttcctaggcgtcactc 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tcagtcccctgtcttcagctggcccaggcttttgcttctggaggttcctaggcgtcactc 356
Query: 353 agaaacatcttgg 365
|||||||||||||
Sbjct: 355 agaaacatcttgg 343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 765
Length adjustment: 9
Effective length of query: 356
Effective length of database: 756
Effective search space: 269136
Effective search space used: 269136
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
