Query= MSMg01no276_o12.b1 MSMg01no276_o12.b1 CHROMAT_FILE:
MSMg01no276_o12.b1 PHD_FILE: MSMg01no276_o12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:55 2005
(675 letters)
>mm_chr16_91054259_91055333
Length = 1075
Score = 1170 bits (605), Expect = 0.0
Identities = 650/665 (97%)
Strand = Plus / Plus
Query: 5 gaattcaggatcacgagggaaagggatgatgggagggcaagtgataagatcagggataga 64
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaggagcaagagggaaagggatgatgggagggcaagtgataagatcagggataga 264
Query: 65 gggaacaaagatgcttaaacagatgcagaggagaggaaagggaagagccaaagagccttg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gggaacaaagatgcttaaacagatgcagaggagaggaaagggaagagccaaagagccttg 324
Query: 125 tggtctgctctgtgactgctctgtgaaagtgaagagagaccagaaaaggacttccccaca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tggtctgctctgtgactgctctgtgaaagtgaagagagaccagaaaaggacttccccaca 384
Query: 185 aaacaatgctgtgtgtgtaaatttgaggctaacagtctgggcaaacgtcttcactcgtgc 244
|||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 385 caacaatgctgtgtgtgtaaatttgaggctaacagtctgggcaaatgtcttcattcgtgc 444
Query: 245 acccctctcttggaaccctgacgccttccgggagagttaaggtcccacacaaccttccca 304
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 445 acccctctcttggaaccctgacaccttccgggagagttaaggtcccacacaaccttccca 504
Query: 305 agtccataattatacttttaaactccagtctctcaatgcatttgttcttcatgactatct 364
||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 505 agtccataaacacacttttaaactccagtctctcaatgcatttgttcttcataactatct 564
Query: 365 ggaaaatatccgtctagaggaatttaggtccccaaacttaagaaatgtgtcatttttgaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggaaaatatccgtctagaggaatttaggtccccaaacttaagaaatgtgtcatttttgaa 624
Query: 425 tgggaattccagaccctgtcacaaaatgaaaaagaaaagaaagaagagggtcactgtggt 484
||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 625 tgggaattccagaccatgtcacaaaatgaaaaggaaaagaaagaagagggtcactgtggt 684
Query: 485 ccccgaaatacagtttcatctataaatcagaagttttaaacttcaagctgttctggggag 544
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ccctgaaatacagtttcatctataaatcagaagttttaaacttcaagctgttctggggag 744
Query: 545 ggtaaagagtgggctcctgcttgatctacctgggacagagtcgcctgcttgcctgtccta 604
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ggtaaagagtgggctcctgcctgatctacctgggacagagtcgcctgcttgcctgtccta 804
Query: 605 gaaaccctaaatacactgccacccagcagtccctcagtgactgctctctgttgtcagact 664
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 805 gaaaccctaaatacactgccacccagcagcccctcagtgactgctctctgttgtcagact 864
Query: 665 gacca 669
|||||
Sbjct: 865 gacca 869
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1075
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1065
Effective search space: 708225
Effective search space used: 708225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no276_o12.g1 MSMg01no276_o12.g1 CHROMAT_FILE:
MSMg01no276_o12.g1 PHD_FILE: MSMg01no276_o12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:56 2005
(343 letters)
>mm_chr16_91223456_91224199
Length = 744
Score = 634 bits (328), Expect = 0.0
Identities = 340/344 (98%), Gaps = 1/344 (0%)
Strand = Plus / Minus
Query: 1 gatgacccataaccgttcaattagcagaatctgtcacacggggcttgtggaggggattag 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 544 gatgacccataaccgttcaattagcagaatctgtcacacggggcttgtggtggggattag 485
Query: 61 gagcttgggcatgtgaggaccactcttgggccttcgttggcaaaccgcagagagggc-ta 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 484 gagcttgggcatgtgaggaccactcttgggccttcgttggcaaaccgcagagagggcgta 425
Query: 120 cgtgggggtgagctctgtggggccaccagctgggatgtggatctccaaagcccctaacaa 179
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 424 cgtgggggtgagctctgtggggccaccagctgggatgtggatctccaaagtccctaacaa 365
Query: 180 acctcaggcggtacaatatgcgggagataggttgcagccacccaggctagtgtgactgcc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 acctcaggcggtacaatatgcgggagataggttgcagccacccaggctagtgtgactgcc 305
Query: 240 cggagcatccgagcgcccaggttccttcttttgttgcgttctactggtttgcctcttctg 299
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 304 cggagcatccgagcgcccaggttccttcttttgttgcgttctactggtttgtctcttctg 245
Query: 300 cgtccggaagtctgcgggagaactgcctgacattctgtacactt 343
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 cgtccggaagtctgcgggagaactgcctgacattctgtacactt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 744
Length adjustment: 9
Effective length of query: 334
Effective length of database: 735
Effective search space: 245490
Effective search space used: 245490
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
