TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCGTGTGTTGCCCAAGTTAGCATGTCCTGTCTCAATATACCTAGGAAT
AGGATCTCTCCGTGGTATCGCAGCTGTTAATTTTTAAAGAACTCTTTAAC
TCTTTTCATGGCTTCTATGCAGTAGACTACATTCCCCTGTGGTGTGAGAG
GGAGAAGGAATAGCCTGTGCTGAATAGCTCGTTTCAGGCTAGTTCTGACC
GTAACACGTTATGTTTATCTTAGATTGTGTTTTTTCTTTAACTCGTGGAA
ATGAGAAAAGCTTGATTTCTTGCTGCATGAGACTCCTTTTAAGACAGTTT
CGTTTTCTAAACGCTGTGTTTTCTGAAGCCTCTGCTCCAGCGAGACCTGT
CATTGAAACACCACCTACTTCACACACTGGCAGGATTGACTTGCAGGATT
TAAGTACATTTTCCAGATGTCAGTGATGACAGCTGTCTTTTTTTTTAGAA
GATGGTGGTCTTGCCTGCATCCCCTGCTCACTTATAGTGCTGTCCCTTCT
CTGGCCAGTTGGTCTGCTTTTCCCGCCACAATTCCACTCTTCTAGCTGTC
CCCTCCACGTGGGATACGATTACACAACGTGGGGCTTCCTCCATCACTGA
TCCTTAGGCTCTGAGCCTTGGTCTGCAGTCACAGTGGCTTCCCTTTGTTT
G

TCGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCAGGAAAAGTCAGGACTAACTGA
GAAACCCAATCTTGAAAAACCAAGACAAAGAAGAAGAGGAGGAAAAGCAG
GTGGAGGAGGGGGAGGAGGGGAGGAAGNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTNN
NNNNNNNNNNNNNNNNNTNTNNNNNNNNNNNTTTTTTTTTTTTTNTTTTT
TNTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTT
TTTTTCCNANNCCCCNNNCCCNNTTTTTTTTTTTTTNNTTTTTTTTTTTT
TTTNNCAAAAAAAAATAAAAAATTTGTTGGGGGGGGGGTGTTTTTTTTTT
TNTTTTTTTTTTTCTTTTTTTTTTTTTCTTGTTTTTTTTTTTTTTAATTT
TTTTTTCTTTTTTTTTTTTTTTTTTTATCTTCTCCTTCCTTTTCTTTTTT
TTTTTTCCTTTTTTTCTTTTTTTTTTCTCTCTTCTTTTTCCTTTTTTTTT
TTTTTTCTTTTTTCTTTCCTCCCCTTTTTCTCTTTTCTCCCCTCCTTCTC
TTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTTCCCTCTT
CTTTTTTTTCCCTTTCCTTTCCTTTTTCTTTTCCT

Query= MSMg01no278_c15.b1 MSMg01no278_c15.b1 CHROMAT_FILE:
MSMg01no278_c15.b1 PHD_FILE: MSMg01no278_c15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:25 2005
         (657 letters)



>mm_chr16_76337257_76338317
          Length = 1061

 Score = 1131 bits (585), Expect = 0.0
 Identities = 639/659 (96%), Gaps = 6/659 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcgtgtgttgcccaagttagcatgtcctgtctcaatatacctaggaataggatct 63
           ||||||||||||| | ||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 861 ggaattcgtgtgtagaccaagttagcatgtcctgtctcaatatacttaggaatagaatct 802

                                                                       
Query: 64  ctccgtggtatcgcagctgttaatttttaaagaactctttaactcttttcatggcttcta 123
           ||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 801 ctccgtggtatagcagctgttaatttttaaagaactatttaactcttttcatggtttcta 742

                                                                       
Query: 124 tgcagtagactacattcccctgtggtgtgagagggagaaggaatagcctgtgctgaatag 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgcagtagactacattcccctgtggtgtgagagggagaaggaatagcctgtgctgaatag 682

                                                                       
Query: 184 ctcgtttcaggctagttctgaccgtaacacgttatgtttatcttagattgtgttttttct 243
           ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctcgtttcaggctcgttctgactgtaacacgttatgtttatcttagattgtgttttttct 622

                                                                       
Query: 244 ttaactcgtggaaatgagaaaagcttgatttcttgctgcatgagactccttttaagacag 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttaactcgtggaaatgagaaaagcttgatttcttgctgcatgagactccttttaagacag 562

                                                                       
Query: 304 tttcgttttctaaacgctgtgt--tttctgaagcctctgctccagcgagacctgtcattg 361
           ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttcgttttctaaacgctgtgtgttttctgaagcctctgctccagcgagacctgtcattg 502

                                                                       
Query: 362 aaacaccacctacttcacacactggcaggattgacttgcaggatttaagtacattttcca 421
           ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 501 aaacaccacctacttcacacactggcaggattgacttgcaggattcaaatacattttcca 442

                                                                       
Query: 422 gatgtcagtgatgacagctgtctttttttttagaagatggtggtcttgcctgcatcccct 481
           ||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 441 gatgtcagtgatggcagctgtctttttttt-agaagatggtggtcttgtctgcatcccct 383

                                                                       
Query: 482 gctcacttatagtgctgtcccttctctggccag---ttggtctgcttttcccgccacaat 538
           ||||||||| |||||||||||||||||||||||   ||||||||||||||||||||||||
Sbjct: 382 gctcacttacagtgctgtcccttctctggccaggagttggtctgcttttcccgccacaat 323

                                                                       
Query: 539 tccactcttctagctgtcccctccacgtgggatacgattacacaacgtggggcttcctcc 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tccactcttctagctgtcccctccacgtgggatacgattacacaacgtggggcttcctcc 263

                                                                      
Query: 599 atcactgatccttaggctctgagccttggtctgcagtcacagtggcttccctttgtttg 657
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 atcactgatccttaggctctgagccttggtctgcagtcacagtggcttccctttgtttg 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1061
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1051
Effective search space:   679997
Effective search space used:   679997
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)