CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTTTCAGTTTCAAAGATCTACACAGTGGGTAAGATGCCTAAGTC
TGTACGTATAGTTTAGGAATGTTAATCAATTTACATAAAGATCTTTAATT
AAGACTCACATAATATATGCTTGCTGTGTTTACTCTTTCAAAGTCTAATA
CTTCTTCATCAGAAAACATACTAGAATATATTATTATTATCTAGTAACCA
TGATTGGATATAATAAAAGACCAAACAATTTTCATATTCAAAGATGTACA
CATTCAATCTATAGTTCAAGATACCTTTGTTTGGATAAATTATATACTAC
AAACACAGCAAAAAATAAACAAAACTCCTAATTCACTTTCACTTTAGTAC
TTTCTTTTTATTTTATCTCTAGAATATTTGAATTTTTATTCCTTTCTTCT
TTTTAAACAAAAAATTACAAATTTGTGTGTGTGTGGTCAATATTTTTAAC
ATCTTTTAAAGGGTATCAACTCATTCAAAATGTACAGTGCTTCATATATT
TTATATTTTAAAAGACAGATCTTTAGATTGAAAAGTTATTAATTGCTTTT
ACCCATTTTTTAAAACATATGGGATCTTGCTTGTTATTTGGAATATTTCC
AGAGACTCATTTGTTGAAGTTCTGCTTCCAATGGAGCAGTGCTCTGAGTT
GAAGCTTTGGGGAATCATTGGATAGAAAGAAATGTGATGCTTTCAAAGAT
TAG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATCTTTTTTAAATTGCTGAGTAGT
ATTCCATTGTGTAAATGTTCCACAATTTCTGTATCCATTTCTCTGTTAAA
GGATATCTGGGCTCTTTTTAGTTTCTTGTTATTATAAATAAAGATGTTAT
GAACATAGTGGAGCATGTGTTCTTCTTACATGTTGGGGATTTTTGGTTAT
ATGCCCAGTAGTGCTATAGCTGGGTCCTCAGGAAGTTCTGTTTCCAGTTT
TCTGAGGAATTGCCAGAATTCTTGGCCATTCAATATTCCTCAGTTGAGAT
TTTCTTTATTAAACTCTGTACCCAATTTTTAATAGGGTTACTTGGTTCTT
TGGAGTCTACCTTCTTGAGTTCTTTGTATATATTGAATATTATCCTTCTC
TCAGATATAGGATTGATAAAGATCTTTTTCCAATCTGTTGGTTGCCATTT
TGTCTTATTGAAAGTGTGCTTAGTCTTACAGAAATTTTGAAATTATATGA
GGTACCATTTGTCTATTGTTGATCTTAAAGGATAAGCCATTGGTGTTCTG
TTCAGGAAAATTTCTCCCTGTACCCATGTATTTGAGGCTCTTCCCCAACT
TCTCTTCTATTAGATTCTTTGTTTCTGATTTTATGCAGAAGCCCTTAATC
CACTTAGACTTGAGCTTTGTACAAGGAGATAAGAATGGATCATGCATTCT
TAA

Query= MSMg01no279_c02.b1 MSMg01no279_c02.b1 CHROMAT_FILE:
MSMg01no279_c02.b1 PHD_FILE: MSMg01no279_c02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:39 2005
         (662 letters)



>mm_chr16_80979152_80980215
          Length = 1064

 Score = 1141 bits (590), Expect = 0.0
 Identities = 642/660 (97%), Gaps = 2/660 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctttttcagtttcaaagatctacacagtgggtaagatgcctaagtctgtacgtat 64
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 205 gaattctttttcagtttcaaagatctacacagtgggtaagatgcctaagtctgtacatat 264

                                                                       
Query: 65  agtttaggaatgttaatcaatttacataaagatctttaattaagactcacataatatatg 124
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 265 agtttaggaatgttaatcaatttacataaagacctttaattaagactcacataatatatg 324

                                                                       
Query: 125 cttgctgtgtttactctttcaaagtctaatacttcttcatcagaaaacatactagaatat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 325 cttgctgtgtttactctttcaaagtctaatacttcttcatcagaaaacatactaggatat 384

                                                                       
Query: 185 attattattatctagtaaccatgattggatataataaaagaccaaacaattttcatattc 244
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 385 attattattatctagtaaccatgattggatataataaaagaccaaccaattttcatattc 444

                                                                       
Query: 245 aaagatgtacacattcaatctatagttcaagatacctttgtttggataaattatatacta 304
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 445 aaagatgtacacattcaatctatagttcaagatacttttgtttggataaattatatacta 504

                                                                       
Query: 305 caaacacagc--aaaaaataaacaaaactcctaattcactttcactttagtactttcttt 362
           ||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 caaacacagcaaaaaaaacaaacaaaactcctaattcactttcactttagtactttcttt 564

                                                                       
Query: 363 ttattttatctctagaatatttgaatttttattcctttcttctttttaaacaaaaaatta 422
           |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 565 ttattttatcactagaatatttgaagttttattcctttcttctttttaaacaaaaaatta 624

                                                                       
Query: 423 caaatttgtgtgtgtgtggtcaatatttttaacatcttttaaagggtatcaactcattca 482
           |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 625 caaatttgtgtgtgtgtgatcaatatttttaacatcttttaaagggtatcaactcattta 684

                                                                       
Query: 483 aaatgtacagtgcttcatatattttatattttaaaagacagatctttagattgaaaagtt 542
           ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 685 aaatgtacaatgcttcatatattttatattttaaaagacagatttttagattgaaaaatt 744

                                                                       
Query: 543 attaattgcttttacccattttttaaaacatatgggatcttgcttgttatttggaatatt 602
           || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 745 atcaattgtttttacccattttttaaaacatatgggatcttgcttgttatttggaatatc 804

                                                                       
Query: 603 tccagagactcatttgttgaagttctgcttccaatggagcagtgctctgagttgaagctt 662
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tccagagactcatttgttgaagttctgcttccaatggagcagtgctctgagttgaagctt 864


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1064
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1054
Effective search space:   687208
Effective search space used:   687208
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)