Query= MSMg01no288_c09.b1 MSMg01no288_c09.b1 CHROMAT_FILE:
MSMg01no288_c09.b1 PHD_FILE: MSMg01no288_c09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:10 2005
(666 letters)
>mm_chr16_43250285_43251350
Length = 1066
Score = 1189 bits (615), Expect = 0.0
Identities = 650/666 (97%), Gaps = 8/666 (1%)
Strand = Plus / Plus
Query: 5 gaattcttctggactaccatttgatcatccattactatcgaaatatttgataattgtaat 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttctggactagcatttgatcatccattactatcgaaatatttgataattgtaat 264
Query: 65 gtgtaattaaagaactacttttataaagtttgtgagattcagtattgaacccaaacagat 124
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtgtaactaaagaattacttttataaagtttgtgagattcagtattgaacccaaacagat 324
Query: 125 atgagatcatatcttggtgagttggcaactttaaatttggtcatttcttttagcttttgt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atgagatcatatcttggtgagttggcaactttaaatttggtcatttcttttagcttttgt 384
Query: 185 tttctagtttataaaattcaaacagtaatagtcttttaagctgtttgaaagttaaatgag 244
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 385 tttctagtttataaaattcaaacattaatagtcttttaagctgtttgaaagttaaatgag 444
Query: 245 atgatataattaaaagtttggcatcatggtgcttgacccgtgatatgaatatattacata 304
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 445 atgatataattaaaagtttggcatcatggtgcttgactcgtgatatgaatatattacata 504
Query: 305 tgagctgttgtggcgaatactctcttttatctctaaagtaaggaaaatcactgttagaag 364
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgagctgttgtggcgaagactctcttttatctctaaagtaaggaaaatcactgttagaag 564
Query: 365 tgatgaaccccc----gncttaaaactctgtatggatatgtgtctgccttcttgtcctta 420
|||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgatgaac----aaatgtcttaaaactctgtatggatatgtgtctgccttcttgtcctta 620
Query: 421 gtctcttccttagctccagtgtgttgttcttgatctatctgtaaatactagtgactctga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtctcttccttagctccagtgtgttgttcttgatctatctgtaaatactagtgactctga 680
Query: 481 tttctctgtaacattggtacttggcagaagcaatgtgaaggaggacagatttatcgtagc 540
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttcctctgtaacattggtacttggcagaagcaatgtgaaggaggacagatttatcgtagc 740
Query: 541 tcacagtattagcaggtatcattccattttagcagggaaggcatgggaatgccctcaact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcacagtattagcaggtatcattccattttagcagggaaggcatgggaatgccctcaact 800
Query: 601 taggggagccaaagaatgcaataaagtttcttctcttcataataggccaggaagcagaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 taggggagccaaagaatgcaataaagtttcttctcttcataataggccaggaagcagaaa 860
Query: 661 gtaaga 666
||||||
Sbjct: 861 gtaaga 866
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space: 692736
Effective search space used: 692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no288_c09.g1 MSMg01no288_c09.g1 CHROMAT_FILE:
MSMg01no288_c09.g1 PHD_FILE: MSMg01no288_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:10 2005
(290 letters)
>mm_chr16_43426729_43427418
Length = 690
Score = 514 bits (266), Expect = e-150
Identities = 284/290 (97%)
Strand = Plus / Minus
Query: 1 attgcactggggaattagtgtgttgggctgtctgggatggtgtgtgcaccgaggatggag 60
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 490 attgcactggggaattagtgtgttgggctgtctgggatggtgtgtgcagtgaggacggag 431
Query: 61 gtgggaagaaggatttttcataggaaagcaactaattcagcttgtagaatgaaaaggaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gtgggaagaaggatttttcataggaaagcaactaattcagcttgtagaatgaaaaggaaa 371
Query: 121 gagctgcccctgtaaacagtcatctcatttctggaccaccagacaggcacacaaaagata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gagctgcccctgtaaacagtcatctcatttctggaccaccagacaggcacacaaaagata 311
Query: 181 catgtgttctacctacttgttttcttgcctctggtgtgaggtgcatagtaggtatggctt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 310 catgtgttctacctacttgttttcttgcctctggtgtgaggtgcatagtaggtatgtctt 251
Query: 241 ggttgaagcttatccactaagaataacagcaaagatacaagtactaattc 290
|||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tgttgaagcatatccactaagaataacagcaaagatacaagtactaattc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
