Query= MSMg01no289_b07.b1 MSMg01no289_b07.b1 CHROMAT_FILE:
MSMg01no289_b07.b1 PHD_FILE: MSMg01no289_b07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:19 2005
(474 letters)
>mm_chr16_82620349_82621222
Length = 874
Score = 857 bits (443), Expect = 0.0
Identities = 467/475 (98%), Gaps = 2/475 (0%)
Strand = Plus / Minus
Query: 1 cactatctctaaatttgtctgatgaatgacaggaaaaaatgctttttttattaatgaaaa 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 618 cactatctctaaatttgtctgatgaatgacagg-aaaaatgctttttttattaatgaaaa 560
Query: 61 c-tttttttttgttgtggccgatcagagttacaacctcagaacaggttatcattaaccaa 119
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 cttttttttttgttgtggctgatcagagttacaacctcagaacaggttatcattaaccaa 500
Query: 120 cagcaacaattaatattatttttgttcatattattaagtagggtgacaccgttttcttaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 cagcaacaattaatattatttttgttcatattattaagtagggtgacaccgttttcttaa 440
Query: 180 ttaatttttcaattaggcagaattttgattcctaagtttgaaacttgttcctaagttgcc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ttaatttttcaattaggcagaattttgattcctaagtttgaaacttgttcctaagttgcc 380
Query: 240 aacacaaaagagagaaccgatgaaagagaattccacattgaggaaccagcgccccccaga 299
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 379 aacacaaaagagagaaccgatgaaagagaattccacattgaggaaccagtgtttcccaga 320
Query: 300 caaagcaagacagttgcacatgtggatctctccaattaaggcagcattaacaagctacac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 caaagcaagacagttgcacatgtggatctctccaattaaggcagcattaacaagctacac 260
Query: 360 accaccaatccaggaaaatcacagcaaagagaagaaaggtcagtcaaaagtctcctaggc 419
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 259 accaccaatccaggaaaatcacagcaaagagaagaaaggtcagtcaaaagtttcctaggc 200
Query: 420 ataatcagcatccaaacgctgacaccattgcatacactagcaagattttatcgaa 474
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 ataatcagcatccaaacgctgacaccattgcatacactagcaagattttatcgaa 145
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space: 400896
Effective search space used: 400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no289_b07.g1 MSMg01no289_b07.g1 CHROMAT_FILE:
MSMg01no289_b07.g1 PHD_FILE: MSMg01no289_b07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:19 2005
(395 letters)
>mm_chr16_82452065_82452859
Length = 795
Score = 659 bits (341), Expect = 0.0
Identities = 382/401 (95%), Gaps = 12/401 (2%)
Strand = Plus / Plus
Query: 1 catactgtttctaaagattttaatcacaagtataggttttccttttatacactcagttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catactgtttctaaagattttaatcacaagtataggttttccttttatacactcagttca 260
Query: 61 cctatttgattcttgtgacttgtagaacaatggccctgttacttgaaaatgcaggtcaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctatttgattcttgtgacttgtagaacaatggccctgttacttgaaaatgcaggtcaac 320
Query: 121 ttctgggacaatttctagtaaacataccaagataatatgtggcaaaatgtcaacctgtaa 180
|||||||| |||||||||||||| |||||||||| ||||||||||||||| |||||||||
Sbjct: 321 ttctgggataatttctagtaaacgtaccaagatagtatgtggcaaaatgtaaacctgtaa 380
Query: 181 atgtaagtgaaccctgaatcatcatagaagttatcatggtaaatg-tgaactttcactca 239
||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||
Sbjct: 381 atgtaagtgaaccctgaatcatcatagaagtaatcatggtaaatgat-aactttcactca 439
Query: 240 ctattgtaatcaataaacaattctctctattcagtccttttgatagttcccccct----- 294
||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 440 ctattgtaatcaataaacaattctctctattcagtccttttgatagttc-----ttaatt 494
Query: 295 catttaatagtttaacgcactgacaaagcaaagaatgttattcaaggaacatcttaggaa 354
||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 495 catttaatagtttaatgcactgacaaagcaaggaatgttattcaaggaacatcttaggaa 554
Query: 355 aagcctacacgacatctttatatgcatatgagttcggtgta 395
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 aagcctacacgacatctttatatgcatatgagttcggtgta 595
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 395
Length of database: 795
Length adjustment: 9
Effective length of query: 386
Effective length of database: 786
Effective search space: 303396
Effective search space used: 303396
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
