Query= MSMg01no291_e02.b1 MSMg01no291_e02.b1 CHROMAT_FILE:
MSMg01no291_e02.b1 PHD_FILE: MSMg01no291_e02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:00 2005
(316 letters)
>mm_chr16_17367950_17368665
Length = 716
Score = 451 bits (233), Expect = e-131
Identities = 280/311 (90%), Gaps = 24/311 (7%)
Strand = Plus / Minus
Query: 5 gaattcagttctcatcatcctactggtggtgacttacagccacctgtaactagctctaag 64
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 568 gaattcagttctcatcatcctactggtggtgacatacagccacctgtaactagctctaag 509
Query: 65 ggatcagatgctctcttctgcctccttaggcacctatgcccatgcccaatgcatggggac 124
|||||||||||||||||| |||||||||||||| |||
Sbjct: 508 ggatcagatgctctcttc------------------------tgcccaatgcatggagac 473
Query: 125 atgtacatgcagatctataaaaatacaagtacaaggaaagctcttgacatcctgtttcac 184
|||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 472 atgtacatgcagatctataaaaatgcaagtacaaggaaagctcttgacatcccgtttcac 413
Query: 185 cctgatgtgacccagcagccttcagtgccctactttcaccactctgaagggctacaccct 244
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 412 cctgatgtgacccagcagccttcagtgccctactttcaccactctgaaggactacaccct 353
Query: 245 caaaataggagccgcctgtcttagtcagggtttctattcctgcacaaacatcatgaccaa 304
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 caaaataggaaccgcctgtcttagtcagggtttctattcctgcacaaacatcatgaccaa 293
Query: 305 gaggcaagttg 315
|| ||||||||
Sbjct: 292 gaagcaagttg 282
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no291_e02.g1 MSMg01no291_e02.g1 CHROMAT_FILE:
MSMg01no291_e02.g1 PHD_FILE: MSMg01no291_e02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:00 2005
(626 letters)
>mm_chr16_17207707_17208732
Length = 1026
Score = 1096 bits (567), Expect = 0.0
Identities = 597/611 (97%), Gaps = 11/611 (1%)
Strand = Plus / Plus
Query: 17 acacacacacacacacacacacacgtttcaaacaaacaaacaaacaaacaaacaacacaa 76
|||||||||||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 226 acacacacacacacacacacacacgtctcaaacaaacaaacaaacaaacaa----cacaa 281
Query: 77 agtttcagttgatataagaaaaggcaccgggcagtgatggcctttaatcccagcatttgg 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 agtttcagttgatataagaaaaggcaccgggcagtgatggcctttaatcccagcatttgg 341
Query: 137 gaggcagagtcaggcggatatctgagtttgaggccagcctggtctacagagtgagttcca 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 gaggcagagtcaggcggatatctgagtttgaggccagcctggtctacagagtgagttcca 401
Query: 197 ggacagctagggctacacagaggaacgctgtctcaaaaaaa-caaaaacaaaaaaaaaca 255
||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 402 ggacagctagggctacacagaggaacgctgtctcaaaaaaaacaaaaacaaaaa----ca 457
Query: 256 aaaaacaaaaaaaaaaaacacaaaaaacaaaaaacaaaaaaacaaaaccaaaaagaaaaa 315
|||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 458 aaaa-caaaaaaaaaacaca-aaaaaacaaaaaacaaaaaaacaaaaccaaaaagaaaaa 515
Query: 316 agaaaagaaaaagaacaaagaaaaggcttaccatgttgggtcctgcgtaggaacagagga 375
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 516 agaaaagaaaaagaacaaagaaaaggcttagcatgttgggtcctgcgtaggaacagagga 575
Query: 376 gttatagccacttagggctcagagctcaaccacaaatttaagcagatcttgtaagaagtt 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gttatagccacttagggctcagagctcaaccacaaatttaagcagatcttgtaagaagtt 635
Query: 436 tacctaatttcaaaactcgaccagaaaccctagtagagccaggtgagatctgaccagaat 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 tacctaatttcaaaactcgaccagaaaccctagtagagccaggtgagatctgaccagaat 695
Query: 496 ccatttttactcaggcccaggatcagcgatcatctaggaaccctactggggatctaattc 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 ccatttttactcaggcccaggatcagcgatcatctaggaaccctactggggatctaattc 755
Query: 556 tggaaaggattgcacactgccagggcgaaagtggaacaggtcacaaaagccctaaagcag 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 tggaaaggattgcacactgccagggcgaaagtggaacaggtcacaaaagccctaaagcag 815
Query: 616 atatgtgtggg 626
|||||||||||
Sbjct: 816 atatgtgtggg 826
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 66
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space: 625856
Effective search space used: 625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
