Query= MSMg01no291_g24.b1 MSMg01no291_g24.b1 CHROMAT_FILE:
MSMg01no291_g24.b1 PHD_FILE: MSMg01no291_g24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:13 2005
(322 letters)
>mm_chr16_35080727_35081446
Length = 720
Score = 557 bits (288), Expect = e-163
Identities = 313/330 (94%), Gaps = 15/330 (4%)
Strand = Plus / Minus
Query: 5 gaattcaagagattatctagaaatgttcattccttggacttggtttcagatatcctctgt 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 428 gaattcaagagattatctagaaatgttcattccttggacttggtttcagatatc--ctgt 371
Query: 65 caagtgtggagtgggacctaaaatttacattttaaataaataatcttggtaattctggtc 124
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 caggtgtggagtgggacctaaaatttacattttaaataaataatcttggtaattctggtc 311
Query: 125 caaatggtccatgaatactaaatgtaaaaagtctgagtactttaaagcagatcagccaat 184
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 310 caaatggtccatgaatactaaatgtaaaaagtcttagtactttaaagcagatcagccaat 251
Query: 185 gaatcagccagtgagccatgagagcagtaacaaaacttgagaagtaggactggggctata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gaatcagccagtgagccatgagagcagtaacaaaacttgagaagtaggactggggctata 191
Query: 245 tctcagttaggaga-------------gtgtctgaaagcttgggctcaatccccagcact 291
|||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 190 tctcagttaggagagtgtccgcctaccgtgtctgaaagcttgggctcaatccccagcact 131
Query: 292 gtagaacaccaggcatggcggcaaacctga 321
||||||||||||||||||||||||||||||
Sbjct: 130 gtagaacaccaggcatggcggcaaacctga 101
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 720
Length adjustment: 9
Effective length of query: 313
Effective length of database: 711
Effective search space: 222543
Effective search space used: 222543
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no291_g24.g1 MSMg01no291_g24.g1 CHROMAT_FILE:
MSMg01no291_g24.g1 PHD_FILE: MSMg01no291_g24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:13 2005
(342 letters)
>mm_chr16_34901991_34902732
Length = 742
Score = 630 bits (326), Expect = 0.0
Identities = 338/342 (98%)
Strand = Plus / Plus
Query: 1 cattcaccacttcctagtcctgacaccggggtgtcaactctccagttaccaccttcctct 60
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 cattcaccacttcctagtcctgacaccggggtgtcaactctccaggcaccaccttcctct 260
Query: 61 gtgtgacatgggagccctggcacatgaggactaaatagacagatggtgccttgtccacag 120
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 261 gtgtgacatgggagccctggcacatgaggactaaatagacggatggcgccttgtccacag 320
Query: 121 accatggaatgttccatatgtgccgtgatgctgggtgtccaaactttaaacaagaatgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 accatggaatgttccatatgtgccgtgatgctgggtgtccaaactttaaacaagaatgtc 380
Query: 181 ccaggaagtggttttacgaaaaaatcaacctcttgattatctgtctgataggtaaagaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccaggaagtggttttacgaaaaaatcaacctcttgattatctgtctgataggtaaagaac 440
Query: 241 aggtgggattggaagttcaaggtcagcctgggctacacagctccaaacgtgagaaacatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggtgggattggaagttcaaggtcagcctgggctacacagctccaaacgtgagaaacatg 500
Query: 301 agcaattgattgagaccaacttcaggccatgggctcctgtgt 342
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agcaattgattgagaccaacttcaggccatgggctcctgtgt 542
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
