Query= MSMg01no292_e15.b1 MSMg01no292_e15.b1 CHROMAT_FILE:
MSMg01no292_e15.b1 PHD_FILE: MSMg01no292_e15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:19 2005
(371 letters)
>mm_chr16_62900531_62901303
Length = 773
Score = 648 bits (335), Expect = 0.0
Identities = 359/367 (97%), Gaps = 2/367 (0%)
Strand = Plus / Plus
Query: 5 gaattcatttagttac-cataaaggtaatttaagcacttcataagaagagaggctccggt 63
|||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 205 gaattcatttagttacatataaaggtaatttaagcacttcataggaagagaggctccggt 264
Query: 64 gctaccgactttgcacagccattgttctgtgttcagaattggctactatactcctgtggt 123
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gctaccgactttgcaaagccattgttctgtgttcagaattggctactatactcctgtggt 324
Query: 124 tccgtaagaggaacagcagctatgcaaagaaatctgcagctcttaatattatatcttatc 183
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 325 tccgtaagaggaacagcagctatgcaaggaaatctgcagctcttaatattatatcttatc 384
Query: 184 tttgcttttcagaaatatctttatgatttccaaaataaatccattattttgcactgcatt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttgcttttcagaaatatctttatgatttccaaaataaatccattattttgcactgcatt 444
Query: 244 tccagccctggttatgagaaagatggagaatctggttttcattctctttacacctaactc 303
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tccagccatggttatgagaaagatggagaatctggttttcattctctttacacctaactc 504
Query: 304 ttccatcattgctcctcattcttttttt-ctttggatgtaaataatctctcaggttagct 362
|||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 505 ttccatcattgctcctcactcttttttttctttggatgtaaataatctctcaggttagct 564
Query: 363 ttttgtg 369
|||||||
Sbjct: 565 ttttgtg 571
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 773
Length adjustment: 9
Effective length of query: 362
Effective length of database: 764
Effective search space: 276568
Effective search space used: 276568
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no292_e15.g1 MSMg01no292_e15.g1 CHROMAT_FILE:
MSMg01no292_e15.g1 PHD_FILE: MSMg01no292_e15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:19 2005
(292 letters)
>mm_chr16_63070515_63071206
Length = 692
Score = 507 bits (262), Expect = e-148
Identities = 283/290 (97%)
Strand = Plus / Minus
Query: 1 tctattttggtcatcattgctgtgttaatattcttcaagtaaatgaagatttagttaaaa 60
||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 490 tctattttgttcaacattgctgtgttaatactcttcaagtaaatgaagatttagttaaag 431
Query: 61 gaatacatttataaaaccataaggcctagcaggtgtgaaatcttcaaaatgtgacagcaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 430 gaatacatttataaaaccataaggcctagcaggtgtgaaatcttcaaaatatgacagcaa 371
Query: 121 cataaaaaaccccagcaaaagctaatattgccatctaaaagcctacagcagttcagaggc 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 370 cataaaaaaccccagcaaaagctaatattgctatctaaaagcctacagcagttcagaggc 311
Query: 181 aaagttggctcatttgcaaacaaccttaatgttttccctgatggctttcagttgaataac 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 310 aaagttggctcatttgcaaacaaccttaatgttttccctgatggctttcaattgaataac 251
Query: 241 tgaagtccgttcagttattatggaaagcaatctacattacttagtctaca 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tgaagtccgttcagttattatggaaagcaatctacattacttagtctaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
