Query= MSMg01no295_m01.b1 MSMg01no295_m01.b1 CHROMAT_FILE:
MSMg01no295_m01.b1 PHD_FILE: MSMg01no295_m01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:31:46 2005
(690 letters)
>mm_chr16_5897265_5898354
Length = 1090
Score = 1245 bits (644), Expect = 0.0
Identities = 647/648 (99%), Gaps = 1/648 (0%)
Strand = Plus / Minus
Query: 43 tttttctttcttctttttatttattttttcttttgtagtgctggggattgaacccaagac 102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1090 tttttctttcttctttttatttattttttcttttgtagtgctggggattgaacccaagac 1031
Query: 103 ctcctgtatcttaggagaaagctctgcttctgagctatatgcccagcttttttttttttc 162
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1030 ctcctgtatcttaggagaaagctctgcttctgagctatatgcccagc-tttttttttttc 972
Query: 163 cttattgttttgagacatctcactaatttgctcaggctggccttgaacttgtgttcctcc 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971 cttattgttttgagacatctcactaatttgctcaggctggccttgaacttgtgttcctcc 912
Query: 223 tgccttagcctcctgagtgctcctgtgtgtgtacataccaccttcccaaaaaatagtccc 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911 tgccttagcctcctgagtgctcctgtgtgtgtacataccaccttcccaaaaaatagtccc 852
Query: 283 agtcttccatacagaggtgaggagctgcatattaagatctaaccatcccagacgcaaaac 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 agtcttccatacagaggtgaggagctgcatattaagatctaaccatcccagacgcaaaac 792
Query: 343 aactcctctttttgagggctgactctcagtgtgtccagctaggtgtccctagagtccctc 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 aactcctctttttgagggctgactctcagtgtgtccagctaggtgtccctagagtccctc 732
Query: 403 tcctgagcttcctgccttagatgatcatctaccgttttgtgatgagcatgcttcaccttg 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 tcctgagcttcctgccttagatgatcatctaccgttttgtgatgagcatgcttcaccttg 672
Query: 463 aatccatcctggcacctgttcgcacaggcagcaatgcaactgtcccttttcacaggccac 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 aatccatcctggcacctgttcgcacaggcagcaatgcaactgtcccttttcacaggccac 612
Query: 523 tcctgctgtactgtgagcttcatgaggcagagactacatggagtctgggtagggtcaaag 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tcctgctgtactgtgagcttcatgaggcagagactacatggagtctgggtagggtcaaag 552
Query: 583 gaatgtggagtctcccctcctatctggacactcaagactacattcttttcctcattgctt 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gaatgtggagtctcccctcctatctggacactcaagactacattcttttcctcattgctt 492
Query: 643 aaatcccaaaccccaagtgctctgtgccctgtgctttggattctctgg 690
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 aaatcccaaaccccaagtgctctgtgccctgtgctttggattctctgg 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1090
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1080
Effective search space: 734400
Effective search space used: 734400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no295_m01.g1 MSMg01no295_m01.g1 CHROMAT_FILE:
MSMg01no295_m01.g1 PHD_FILE: MSMg01no295_m01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:31:46 2005
(659 letters)
>mm_chr16_5797244_5798302
Length = 1059
Score = 1266 bits (655), Expect = 0.0
Identities = 658/659 (99%)
Strand = Plus / Plus
Query: 1 taggcttccaccacagagggcactgggttcgtagactactgttacaattctttgatatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taggcttccaccacagagggcactgggttcgtagactactgttacaattctttgatatgg 260
Query: 61 tttattacttgtatgggatgtgcatatgggtgaatattgtatttgtgaaatatactcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttattacttgtatgggatgtgcatatgggtgaatattgtatttgtgaaatatactcttt 320
Query: 121 aatagaaaataaaggccaaaattctgcacatttataagtgtagtgtatacaatgtatgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatagaaaataaaggccaaaattctgcacatttataagtgtagtgtatacaatgtatgca 380
Query: 181 ctcatgggtttggctgtgtgtatatatgtatacagaggtgagtgtggccatcagaaatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcatgggtttggctgtgtgtatatatgtatacagaggtgagtgtggccatcagaaatga 440
Query: 241 ttgtcaggtgacctcctctgtctctgtcactctgtgtcttagttttgagacagagtctct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgtcaggtgacctcctctgtctctgtcactctgtgtcttagttttgagacagagtctct 500
Query: 301 gactgaaccttgagcttgtagatgcagctaggctggctgccagaaagtgccagggatcat 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 501 gactgaaccttgagcttgtagatgcagctaggctggctgccagaaagtgccagggatctt 560
Query: 361 tctctccctgcttcctcagtgctggggtcacttgtgtgcactctgggctgccacacctgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctctccctgcttcctcagtgctggggtcacttgtgtgcactctgggctgccacacctgg 620
Query: 421 cattttggatggatacctgggatcaaaattcatgtctgaatgcattcagcagtttatgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cattttggatggatacctgggatcaaaattcatgtctgaatgcattcagcagtttatgaa 680
Query: 481 gctattttcctagaaccaaactcagctttcctttggaagaagttacctaacaacaaggtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gctattttcctagaaccaaactcagctttcctttggaagaagttacctaacaacaaggtg 740
Query: 541 caccagggtagtctctacatctctctgcccttccatctttctggaatgccagttttccac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 caccagggtagtctctacatctctctgcccttccatctttctggaatgccagttttccac 800
Query: 601 ctaccccactgctaaacatggcctccccattgcacctcactctgcccttctttgagaac 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ctaccccactgctaaacatggcctccccattgcacctcactctgcccttctttgagaac 859
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space: 680801
Effective search space used: 680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
