Query= MSMg01no296_g11.b1 MSMg01no296_g11.b1 CHROMAT_FILE:
MSMg01no296_g11.b1 PHD_FILE: MSMg01no296_g11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:35 2005
(665 letters)
>mm_chr16_43024325_43025386
Length = 1062
Score = 1239 bits (641), Expect = 0.0
Identities = 658/665 (98%), Gaps = 3/665 (0%)
Strand = Plus / Plus
Query: 1 aaagaaaatttagaagggtcgtttttcaaggacataattttaattagagcatggcttgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 aaagaaaatttagaagggtcgtttttcaaggacataattttaattagagaatggcttgtg 260
Query: 61 gctaaattttcttattatggaacatagcatattgttttcaaaagcccctcagcatcctgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctaaattttcttattatggaacatagcatattgttttcaaaagcccctcagcatcctgc 320
Query: 121 acagaaatggtggcatttctgaggatgatagcaaaggttgttctcttgcctacagacaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acagaaatggtggcatttctgaggatgatagcaaaggttgttctcttgcctacagacaga 380
Query: 181 tgtgttcatatgtgcacatatgaagacacacctgcacacacatccaaatattaagttcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtgttcatatgtgcacatatgaagacacacctgcacacacatccaaatattaagttcta 440
Query: 241 aaactcattgttaatatgattgaaggaagtctctattgatactctgcccctgtccttcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaactcattgttaatatgattgaaggaagtctctattgatactctgcccctgtccttcca 500
Query: 301 gatgtgtgcacacattgcatcgaatgtggtatgtttagctgaggacctgtactggatgtt 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 gatgtgtgcacacattgcatcgaatgtggtatgtttagctgaggatctgtactggatgtt 560
Query: 361 ttcagttcttgtaatgattatgtttccttatttttttaaaactggaactgttagaattca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttcagttcttgtaatgattatgtttccttatttttttaaaactggaactgttagaattca 620
Query: 421 tgaagtcacctacattcttctcaaagctaatcatgaagacgttaatgtaaatgcaaatgg 480
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 621 tgaagtcacctacattcttctcaaagctaatcatgaagatgttaatgtaaatgcaaatgg 680
Query: 481 tttcttgaatgattcctaattttaaatgtttttttttttttgtttgtagataactgaatg 540
|||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 681 tttcttgaatgactcctaattttaaatgtttttttttt---gtttgtagataactgaatg 737
Query: 541 gagtgtttgaattgcgctttgcgactctgaaggctgaaggtaacggccagtgacggtttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 gagtgtttgaattgcgctttgcgactctgaaggctgaaggtaacggccagtgacggtttc 797
Query: 601 catgggttttgtcttcgtggacatgctttattattttcaaggccatggatttactactga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 catgggttttgtcttcgtggacatgctttattattttcaaggccatggatttactactga 857
Query: 661 aactt 665
|||||
Sbjct: 858 aactt 862
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1062
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1052
Effective search space: 689060
Effective search space used: 689060
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no296_g11.g1 MSMg01no296_g11.g1 CHROMAT_FILE:
MSMg01no296_g11.g1 PHD_FILE: MSMg01no296_g11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:35 2005
(607 letters)
>mm_chr16_43024325_43025328
Length = 1004
Score = 1143 bits (591), Expect = 0.0
Identities = 602/607 (99%), Gaps = 3/607 (0%)
Strand = Plus / Plus
Query: 1 aaagaaaatttagaagggtcgtttttcaaggacataattttaattagagaatggcttgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaagaaaatttagaagggtcgtttttcaaggacataattttaattagagaatggcttgtg 260
Query: 61 gctaaattttcttattatggaacatagcatattgttttcaaaagcccctcagcatcctgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctaaattttcttattatggaacatagcatattgttttcaaaagcccctcagcatcctgc 320
Query: 121 acagaaatggtggcatttctgaggatgatagcaaaggttgttctcttgcctacagacaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acagaaatggtggcatttctgaggatgatagcaaaggttgttctcttgcctacagacaga 380
Query: 181 tgtgttcatatgtgcacatatgaagacacacctgcacacacatccaaatattaagttcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtgttcatatgtgcacatatgaagacacacctgcacacacatccaaatattaagttcta 440
Query: 241 aaactcattgttaatatgattgaaggaagtctctattgatactctgcccctgtccttcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaactcattgttaatatgattgaaggaagtctctattgatactctgcccctgtccttcca 500
Query: 301 gatgtgtgcacacattgcatcgaatgtggtatgtttagctgaggatctgtactggatgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gatgtgtgcacacattgcatcgaatgtggtatgtttagctgaggatctgtactggatgtt 560
Query: 361 ttcagttcttgtaatgattatgtttccttatttttttaaaactggaactgttagaattca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttcagttcttgtaatgattatgtttccttatttttttaaaactggaactgttagaattca 620
Query: 421 tgaagtcacctacattcttctcaaagctaatcatgaagacgttaatgtaaatgcaaatgg 480
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 621 tgaagtcacctacattcttctcaaagctaatcatgaagatgttaatgtaaatgcaaatgg 680
Query: 481 tttcttgaatgattcctaattttaaatgtttttttttttttgtttgtagataactgaatg 540
|||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 681 tttcttgaatgactcctaattttaaatgtttttttttt---gtttgtagataactgaatg 737
Query: 541 gagtgtttgaattgcgctttgcgactctgaaggctgaaggtaacggccagtgacggtttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 gagtgtttgaattgcgctttgcgactctgaaggctgaaggtaacggccagtgacggtttc 797
Query: 601 catgggt 607
|||||||
Sbjct: 798 catgggt 804
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1004
Length adjustment: 10
Effective length of query: 597
Effective length of database: 994
Effective search space: 593418
Effective search space used: 593418
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
