Query= MSMg01no300_c23.b1 MSMg01no300_c23.b1 CHROMAT_FILE:
MSMg01no300_c23.b1 PHD_FILE: MSMg01no300_c23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:37:17 2005
(618 letters)
>mm_chr16_96569387_96570399
Length = 1013
Score = 1106 bits (572), Expect = 0.0
Identities = 608/628 (96%), Gaps = 15/628 (2%)
Strand = Plus / Plus
Query: 1 aggaaatgctaacagttcataaacactgtttagtgttaagacttcggatgccgctagccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 aggaaatgctaacagttcataaacactgtttagtgttaagacttcggatgccgctagccc 250
Query: 61 tacttaagggaagccaaaatagtttcttttgtt-ctggtaggatcaa---------tttt 110
||||||||||||||||||||||||||||||||| | ||||||||||| ||||
Sbjct: 251 tacttaagggaagccaaaatagtttcttttgttccgggtaggatcaattttttttttttt 310
Query: 111 tttttttaaacattgcaggagtttcccagtaaggtctcagcatttgaaagcagcagggac 170
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ttttttttaacattgcaggagtttcccagtaaggtctcagcatttgaaagcagcagggac 370
Query: 171 acagctttctttgttgcagtcaagataaaagggctgctgacagcttcaaacgggcagggc 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 acagctttctttgttgcagtcaagataaaagggctgctgacagcttcaaacgggcagggc 430
Query: 231 aggaaggatccagatgtttatgatggagcttccagatctggaagtggataggctttctcc 290
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 431 aggaaggatccagatgtttatgatggagcttccagatctggaagtggataggatttctcc 490
Query: 291 tcagcgggccaaccaggattcctctctaggacctgagtagacagagggttactggtttcc 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tcagcgggccaaccaggattcctctctaggacctgagtagacagagggttactggtttcc 550
Query: 351 cgagcgacccataagtcaccctctggaacacagacatacgattttggtcttggtcactag 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 cgagcgacccataagtcaccctctggaacacagacatacgattttggtcttggtcactag 610
Query: 411 gagtctgtgtaagtgtgtgaaggaaaggcacagccggcgcaccgtgttcatggcttcaca 470
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gagtctgtgtaagcgtgtgaaggaaaggcacagccggcgcaccgtgttcatggcttcaca 670
Query: 471 gatcgtaacgtaagcaagtgtgcagtgaaaccaccaagtggaccactccttggctgcaaa 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 gatcgtaacgtaagcaagtgtgcagtgaaaccaccaagtggaccactccttggctgcaaa 730
Query: 531 aaataaaaaggtttattgggcaggggggaattggaagacatcatgactacctcttggagg 590
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 gaa-----aggtttattgggcaggggggaattggaagacatcatgactacctcttggagg 785
Query: 591 aagagagaattgcaaaaggtggggagcc 618
||||||||||||||||||||||||||||
Sbjct: 786 aagagagaattgcaaaaggtggggagcc 813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1013
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1003
Effective search space: 609824
Effective search space used: 609824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no300_c23.g1 MSMg01no300_c23.g1 CHROMAT_FILE:
MSMg01no300_c23.g1 PHD_FILE: MSMg01no300_c23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:37:17 2005
(290 letters)
>mm_chr16_96731955_96732644
Length = 690
Score = 362 bits (187), Expect = e-104
Identities = 214/223 (95%)
Strand = Plus / Minus
Query: 1 aaaaaagagagaaatttccaccatcgtctgtttgatggaattttttctaaccctgaaaga 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 339 aaaaaagagagaaatttccaccatcgtctgtttgatggaattttttctaaacctgaaaga 280
Query: 61 gcctagagtcacgtgggaagaagggggcttgattgcaggattgcccatatcagacaggac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gcctagagtcacgtgggaagaagggggcttgattgcaggattgcccatatcagacaggac 220
Query: 121 tgtggctgtggctgtggctctggctgtggctgtggctgtggctgtggctgtggctctggc 180
||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 219 tgtggctgtggctgtggctgtggctgtggctgtggctgtggctctggctctggctctggc 160
Query: 181 tgtggctctggctgtggctgtggctgtggctctggttctggct 223
| ||||||||||| ||||| ||||| ||||||||| |||||||
Sbjct: 159 tctggctctggctctggctctggctctggctctggctctggct 117
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
