TTTTGTGGAATACCCTTTCACAGAAGAAAACGTACCCATCCCTTACCCCA
CCATTTTTTTAAANNNGGTCTATAATTTGGCGGGCCGGCTAATACGAACT
CCACTTAATATTCCAAAAGAATCCGCGGNAATTCTTTGTTTAGCCCTGTA
CCCCATTTTAATAGATTTATTTGGTTTTCTGGAGTCTAACTTCCTTGGAG
TCCTTGGGAATATAATTGGGGAAAAAATTAGCTCTCCTCCGGAAAAAAAG
GAAAAGGAAAAAGGAAACTTTTTTCCCAAACCCCGTTGGGTTGGCCCTTT
TTTCCCCAATGGGGAGGGGGCCTTTTGGCTAAAAAGTTTTGAATTTTAGG
AGCCCTTTGGAAATTTGGGTTAAGGAAAAGGGTGGGGGTTCGGTAAAAAA
TTTTCCCGGGGGCCCTTCCTTGGGGATTTTCCCCCCCCTTTTTTAAAAAA
AAGGGGGGCCG

CAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXACCTCATTCATAAATGTTTATAACAAATAGT
TCTATTGAAGTTCCTCGTGATGAGTTTTATGTAAAACTACTTTTGGTGAT
GCTTCATTTCATGGTAGAAAGCTATGGCTGGCTTTTCACTTGCTCCATAT
CTGGATGCATTCAGATGGACAGGTCATCTTGCCAATTCTGAGTTTTGTAC
AGTCAGAGTATTGGGACCATATGTCAAGCTGGTATTTAGATATTTGAGAA
CCTTTTCCACTTATAGATCAACTACTGAATTCACAATAGTGTACACTTAT
CAGGACAAAATATATATTAGTCCTTAGGAATGTAATTTTTATTAATAAAA
GAGAGATATGCTGATAGCATTTTAAAAGATAAAAGAATAGTTAAGAGCAG
ACTTTTTATATATGAAAAATAATGTAATTACCTATTCACTCATATGAAAT
AAGAAGAAAAAAATGCAAGATTATTTTATATGATCATCTTATGACATATA
ATTATATATGTTGACATATCAGTATATTATCAAAAAGTAGATGGTATCAT
AAACTTACATAGTAACTTTAATTTTACTTTTTAAGTTACTTAATAATTTA
GCCATTATTATATATCAATTATGTCACCTGAGAAGTAATAATTATTACTT
TAAAAGACCCAAAGATTATAAAATCATGTTAGAGAAAGTTGAAGTGATTT
ATATATTTAAAATTTA

Query= MSMg01no301_a16.g1 MSMg01no301_a16.g1 CHROMAT_FILE:
MSMg01no301_a16.g1 PHD_FILE: MSMg01no301_a16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:38:20 2005
         (674 letters)



>mm_chr16_74940209_74941282
          Length = 1074

 Score = 1265 bits (654), Expect = 0.0
 Identities = 669/674 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   acctcattcataaatgtttataacaaatagttctattgaagttcctcgtgatgagtttta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 874 acctcattcataaatgtttataacaaatagttctattgaagttcctcgtgatgagtttta 815

                                                                       
Query: 61  tgtaaaactacttttggtgatgcttcatttcatggtagaaagctatggctggcttttcac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 tgtaaaactacttttggtgatgcttcatttcatggtagaaagctatggctggcttttcac 755

                                                                       
Query: 121 ttgctccatatctggatgcattcagatggacaggtcatcttgccaattctgagttttgta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 ttgctccatatctggatgcattcagatggacaggtcatcttgccaattctgagttttgta 695

                                                                       
Query: 181 cagtcagagtattgggaccatatgtcaagctggtatttagatatttgagaaccttttcca 240
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 694 cagtcagagtattgggaccatatgtcaagctggtatttagatatctgagaaccttttcca 635

                                                                       
Query: 241 cttatagatcaactactgaattcacaatagtgtacacttatcaggacaaaatatatatta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 cttatagatcaactactgaattcacaatagtgtacacttatcaggacaaaatatatatta 575

                                                                       
Query: 301 gtccttaggaatgtaatttttattaataaaagagagatatgctgatagcattttaaaaga 360
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 574 gtccttaggaatgtaatttttattaataaaagagagatatgccgatagcattttaaaaga 515

                                                                       
Query: 361 taaaagaatagttaagagcagactttttatatatgaaaaataatgtaattacctattcac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 taaaagaatagttaagagcagactttttatatatgaaaaataatgtaattacctattcac 455

                                                                       
Query: 421 tcatatgaaataagaagaaaaaaatgcaagattattttatatgatcatcttatgacatat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tcatatgaaataagaagaaaaaaatgcaagattattttatatgatcatcttatgacatat 395

                                                                       
Query: 481 aattatatatgttgacatatcagtatattatcaaaaagtagatggtatcataaacttaca 540
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 394 aattacatatgttgacatatcagtatattatcaaaaagtagatggtatcataaacctaca 335

                                                                       
Query: 541 tagtaactttaattttactttttaagttacttaataatttagccattattatatatcaat 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tagtaactttaattttactttttaagttacttaataatttagccattattatatatcaat 275

                                                                       
Query: 601 tatgtcacctgagaagtaataattattactttaaaagacccaaagattataaaatcatgt 660
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 274 tatgtcacctgagaagtaataattattactttaaaagacccaaagattacaaaatcatgt 215

                         
Query: 661 tagagaaagttgaa 674
           ||||||||||||||
Sbjct: 214 tagagaaagttgaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1074
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1064
Effective search space:   706496
Effective search space used:   706496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)