Query= MSMg01no302_p23.b1 MSMg01no302_p23.b1 CHROMAT_FILE:
MSMg01no302_p23.b1 PHD_FILE: MSMg01no302_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:46 2005
(319 letters)
>mm_chr16_24064275_24064993
Length = 719
Score = 555 bits (287), Expect = e-162
Identities = 311/325 (95%), Gaps = 12/325 (3%)
Strand = Plus / Minus
Query: 4 ggaattcaggaaagcagaggctatctcaaagccttctgtctcagcatgctgccattgctg 63
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 677 ggaattcaggaaagcagaggctatctcaaagccttctgtctaagcatgctgccattgctg 618
Query: 64 ccaccccccactgctgctgctgctgctactgctgttatggctgctgctgctgctgctgc- 122
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ccacccccca---ctgctgctgctgctactgctgttatggctgctgctgctgctgctgct 561
Query: 123 -----tgctgctgctgcca---ctgccgccaccgctgatgcctggagaatggctctcctg 174
|||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 560 gctgttgctgctgctgccaccgctgccaccaccgctgatgcctggagaatggctctcctg 501
Query: 175 agcttttcttctagaaccagaggatctattttcacagatcccatttcctcatctgtgaat 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agcttttcttctagaaccagaggatctattttcacagatcccatttcctcatctgtgaat 441
Query: 235 aaaagtttggactaaataaagtcagttccactccactccaagtctggccacgaaaacaga 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aaaagtttggactaaataaagtcagttccactccactccaagtctggccacgaaaacaga 381
Query: 295 tcatgaattcagattttatcctact 319
|||||||||||||||||||||||||
Sbjct: 380 tcatgaattcagattttatcctact 356
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no302_p23.g1 MSMg01no302_p23.g1 CHROMAT_FILE:
MSMg01no302_p23.g1 PHD_FILE: MSMg01no302_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:46 2005
(609 letters)
>mm_chr16_24034570_24035578
Length = 1009
Score = 1170 bits (605), Expect = 0.0
Identities = 608/609 (99%)
Strand = Plus / Plus
Query: 1 tctgcagctctgaaagccttagatagacctttttccaagaccaagctgccttgtttactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgcagctctgaaagccttagatagacctttttccaagaccaagctgccttgtttactg 260
Query: 61 agggttaggtcttcactggctttcttggctagatctagacctcttctgtggctcctgtag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agggttaggtcttcactggctttcttggctagatctagacctcttctgtggctcctgtag 320
Query: 121 catggcttgcctgcttcacattgcccttctttgttatagagatggttttctttcttcaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catggcttgcctgcttcacattgcccttctttgttatagagatggttttctttcttcaag 380
Query: 181 cctcataatcgaacctctattacattttcttcttcagcttccttctctcttccagcatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctcataatcgaacctctattacattttcttcttcagcttccttctctcttccagcatgt 440
Query: 241 gcagaatagcagagagctctggttttaaggaatgctgtggctgctttgaccttctaccta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcagaatagcagagagctctggttttaaggaatgctgtggctgctttgaccttctaccta 500
Query: 301 aaccactagcactgccaccatgcctatcaataaggttgttaaactatgtcatcactcatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaccactagcactgccaccatgcctatcaataaggttgttaaactatgtcatcactcatt 560
Query: 361 tgattgtttgggttgcacttccaagctgtcttctttgcattctggtggctattttgtgta 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cgattgtttgggttgcacttccaagctgtcttctttgcattctggtggctattttgtgta 620
Query: 421 aggagcctagttttaaaggagctttcggcatgcttccttctttaaatgtgctcatttcta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aggagcctagttttaaaggagctttcggcatgcttccttctttaaatgtgctcatttcta 680
Query: 481 acttgatttaaattaagaaatacatgtttcgccgggcgtggtggcgcacacctttaatcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acttgatttaaattaagaaatacatgtttcgccgggcgtggtggcgcacacctttaatcc 740
Query: 541 cagcactttggaggcagaggcaggcgaactctcagaagagttcgaggccagcctggtcta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cagcactttggaggcagaggcaggcgaactctcagaagagttcgaggccagcctggtcta 800
Query: 601 cagagtgag 609
|||||||||
Sbjct: 801 cagagtgag 809
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1009
Length adjustment: 10
Effective length of query: 599
Effective length of database: 999
Effective search space: 598401
Effective search space used: 598401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
