Query= MSMg01no305_d09.b1 MSMg01no305_d09.b1 CHROMAT_FILE:
MSMg01no305_d09.b1 PHD_FILE: MSMg01no305_d09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:44:51 2005
(422 letters)
>mm_chr16_3933816_3934637
Length = 822
Score = 762 bits (394), Expect = 0.0
Identities = 403/406 (99%)
Strand = Plus / Plus
Query: 16 gaattcacaatgtacctcaagatgaccttcaacctgatactcctgcttcggcctcctagg 75
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 216 gaattcacaatgtacctcaagatgaccttcaacctgatactcctgcttcggcctcctaag 275
Query: 76 cattgagatacaggatgcagcactatgccctgcgcatgtaatattcttatctctgtccct 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 cattgagatacaggatgcagcactatgccctgcgcatgtaatattcttatctctgtccct 335
Query: 136 gggaagagctggttcacatttgtggtttcagatttcccacagatatctcagaaatggcct 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gggaagagctggttcacatttgtggtttcagatttcccacagatatctcagaaatggcct 395
Query: 196 ctgtatctgagctctctgcactatttgttttggtcagtgcaggtctgtcccttgtggcca 255
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 396 ctgtatctgagctctctgcactatttgttttggtcagtgcaggtctatcccttgtggcca 455
Query: 256 aggaattaacacagaaaaggtgttacataagagcctcttacaaacctcatttgatggatg 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 aggaattaacacagaaaaggtgttacataagagcctcttacaaacctcatttgatggatg 515
Query: 316 ggagccaacactagagaaactgtaacttgctcaatgttagttttgttccaaattctgctt 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ggagccaacactagagaaactgtaacttgctcaatgttagttttgttccaaattctgctt 575
Query: 376 aagtacttgcagagtaaaatcaggtagcatagttccagaacctatg 421
||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 576 aagtacttgcagagtaaaatcaggtagcacagttccagaacctatg 621
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space: 335769
Effective search space used: 335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_d09.g1 MSMg01no305_d09.g1 CHROMAT_FILE:
MSMg01no305_d09.g1 PHD_FILE: MSMg01no305_d09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:44:51 2005
(384 letters)
>mm_chr16_3986351_3987134
Length = 784
Score = 712 bits (368), Expect = 0.0
Identities = 380/384 (98%)
Strand = Plus / Minus
Query: 1 ctgctacgcagaggaagcttctccagtgggggagagcagcagacccagatgggagcacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 ctgctacgcagaggaagcttctccagtgggggagagcagcagacccagatgggagcacta 525
Query: 61 acccgcatggggaagacggtgcagtttctgagccttccctggcaggtgtccagagtaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 acccgcatggggaagacggtgcagtttctgagccttccctggcaggtgtccagagtaaca 465
Query: 121 gacagctagaaaatacagagcacatggagtcatctgggttagaaaaagaagaggcactag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 gacagctagaaaatacagagcacatggagtcatctgggttagaaaaagaagaggcactag 405
Query: 181 ccagctgggaacaagaaggacattccactccactgcaggaccagtgcccagactgggcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ccagctgggaacaagaaggacattccactccactgcaggaccagtgcccagactgggcag 345
Query: 241 ggaaagcagaggcccaggatgcactgggggaggcaactgacgaccccagcttctgcagcc 300
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 344 ggaaagcagaggcccaggatgcattgggggaggcaactgacgaccccagcttctgcagcc 285
Query: 301 gccacaggagggggaaagagtgcttgcctttgttcccaaacaaagcccatggctgcaaac 360
|||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 284 gccacaggagggggaaagagtgcttgcctttgcacccaaacaaggcccatggctgcaaac 225
Query: 361 agccccttccatcaaatccaagag 384
||||||||||||||||||||||||
Sbjct: 224 agccccttccatcaaatccaagag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 784
Length adjustment: 9
Effective length of query: 375
Effective length of database: 775
Effective search space: 290625
Effective search space used: 290625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
