Query= MSMg01no305_h07.b1 MSMg01no305_h07.b1 CHROMAT_FILE:
MSMg01no305_h07.b1 PHD_FILE: MSMg01no305_h07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:24 2005
(423 letters)
>mm_chr16_43564454_43565276
Length = 823
Score = 729 bits (377), Expect = 0.0
Identities = 401/409 (98%), Gaps = 1/409 (0%)
Strand = Plus / Plus
Query: 16 gaattctgtcttcactatcttcaagctttct-atcacagatttttcacgagctctctgag 74
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 215 gaattctgtcttcactatcttcaagctttctaatcacagacttttcacgagctctctgag 274
Query: 75 ttcctcctctgtacactgggcataataatcaacatagctgagaaggttaaatgagaatat 134
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 275 ttcctcctctgtacactgggcatagtaatcaacatagctgagaaggttaaatgagaatat 334
Query: 135 tttcatatatgcgaatctgtggtccctgataaaatgtcgacattcataaatagctgttct 194
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 335 tttcatatatgcgaatctgtggtccctgataaaatgtcgacattcataaatagctgttgt 394
Query: 195 tgctttcacagtgccttttatgtgagcttctaccccaaagcactctcccattttatactg 254
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 395 tgctttcacagtgccttttatgtgagcttctaccccaaagcactcacccattttatactg 454
Query: 255 acttgatgatctctgagaagtgagtagcagtggccacactgaagtcagacctcagcctca 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 acttgatgatctctgagaagtgagtagcagtggccacactgaagtcagacctcagcctca 514
Query: 315 tgtgatgcatggcattgtgttccttagcagctcaactcaactggcttccaaggcttttgt 374
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 515 tgtgatgcatggcattgtgttccttagcagctcaactcaactggcttccaaggcaggtgt 574
Query: 375 acagagacaccatcaaagctacaggcagaaaagaagtgaccctctgtct 423
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 acagagacaccatcaaagctacaggcagaaaagaagtgaccctctgtct 623
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_h07.g1 MSMg01no305_h07.g1 CHROMAT_FILE:
MSMg01no305_h07.g1 PHD_FILE: MSMg01no305_h07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:24 2005
(388 letters)
>mm_chr16_43658678_43659465
Length = 788
Score = 716 bits (370), Expect = 0.0
Identities = 379/382 (99%)
Strand = Plus / Minus
Query: 1 acctactatgagtttggtgcatcatagaggttgtgtactgggtgctggggctcttgtagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 acctactatgagtttggtgcatcatagaggttgtgtactgggtgctggggctcttgtagt 523
Query: 61 tcctttagtcttcagaactcattggctgcactgggcctccccatactactgtaggttgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tcctttagtcttcagaactcattggctgcactgggcctccccatactactgtaggttgag 463
Query: 121 aacttagcatcctaaatttgaggagtagaagacacatggcaaaaatgagacatttattgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 aacttagcatcctaaatttgaggagtagaagacacatggcaaaaatgagacatttattgc 403
Query: 181 cttgagtttaagaggccattggctgaaagagttgggggaggaggctggattttaagtttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 cttgagtttaagaggccattggctgaaagagttgggggaggaggctggattttaagtttc 343
Query: 241 taactgggcactgactgcatgattttaagctccttactcaacttttcaaggtctccattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 taactgggcactgactgcatgattttaagctccttactcaacttttcaaggtctccattg 283
Query: 301 ttttgtatgtaagaagtgaggttacagtttttttctatatcacaaagttgtgatacatgg 360
||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||
Sbjct: 282 ttttgtatgtaagaagtgaggttacagttctgtcctatatcacaaagttgtgatacatgg 223
Query: 361 ctgtcaagctttctcaggaatt 382
||||||||||||||||||||||
Sbjct: 222 ctgtcaagctttctcaggaatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 788
Length adjustment: 9
Effective length of query: 379
Effective length of database: 779
Effective search space: 295241
Effective search space used: 295241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
