Query= MSMg01no306_c17.b1 MSMg01no306_c17.b1 CHROMAT_FILE:
MSMg01no306_c17.b1 PHD_FILE: MSMg01no306_c17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:46:52 2005
(651 letters)
>mm_chr16_72946175_72947224
Length = 1050
Score = 1147 bits (593), Expect = 0.0
Identities = 638/653 (97%), Gaps = 5/653 (0%)
Strand = Plus / Plus
Query: 1 atctttgttgtatgcaaacatgaaaccattttataagaatttcaatgcctttagattttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atctttgttgtatgcaaacatgaaaccattttataagaatttcaatgcctttagattttg 260
Query: 61 atgtccacagggcttgtgaaactaatgccataatatattgatcactgcttgggtggataa 120
|||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 261 atgtccacagggctcgtgaaaccaatgccataatatattgatcactgcttgggtggat-a 319
Query: 121 atccctggcaataattgtcatagaatttagccttaaaatttggatcaagcggtatcttcc 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atccctggcaataattgacatagaatttagccttaaaatttggatcaagcggtatcttcc 379
Query: 181 attagaagagatgagcatccctgtacttagtcattttctaatataaaagttacccttttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 attagaagagatgagcatccctgtacttagtcattttctaatataaaagttacccttttg 439
Query: 241 acaataagataatttgggttttctatcgtgtcatggttacatgtggccctttgagagtgc 300
||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 440 acaataagataatatgggttttctatcatgtcgtggttacatgtggccctttgagagtgc 499
Query: 301 tagatggttatttcagaattcagaattacagtgaaaaatcaggtcaattgatcaatcggt 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 500 tagatggttatttcagaattcagaattacagtgaaaaatcaggtcaattgatcaattggt 559
Query: 361 acttaagaagccatataagtataagtactgtagattttactgacagaagtaagttacaaa 420
||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 560 acttaagaagctatataagtataagtactgtagattttactgacaaaagtaagttacaaa 619
Query: 421 ctttaaaactgtctttcaaaaaacaaatcctggaaaaagaaagacctaactgataaatgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ctttaaaactgtctttcaaaaaacaaatcctggaaaaagaaagacctaactgataaatgt 679
Query: 481 gaggtttgcatcacagagttcactgaatggagccttagcaacacagcagatctttgtgta 540
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gaggtttgcatcacagatttcactgaatggagccttagcaacacagcagatctttgtgta 739
Query: 541 aggggg-tcacatgcttgttttagaactcatataatatctaggta-aaaaaagtaatgag 598
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 740 aggggggtcacatgcttgttttagaactcatataatatctaggtataaaaaagtaatgag 799
Query: 599 gaaaaaaaaaacctaaaagcaagaccttctgtttggagtttccttactttgat 651
||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 -aaaaaaaaaac-taaaagcaagaccttctgtttggagtttccttactttgat 850
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1050
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1040
Effective search space: 666640
Effective search space used: 666640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no306_c17.g1 MSMg01no306_c17.g1 CHROMAT_FILE:
MSMg01no306_c17.g1 PHD_FILE: MSMg01no306_c17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:46:52 2005
(609 letters)
>mm_chr16_73101386_73102394
Length = 1009
Score = 1118 bits (578), Expect = 0.0
Identities = 600/608 (98%), Gaps = 2/608 (0%)
Strand = Plus / Minus
Query: 2 aggccagcctggcctacagagtgagttccaggacagctagagctacacacagaaaccctg 61
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 932 aggccagcctggcctacagagtgagttccaggacagctagagctacacagagaaaccctg 873
Query: 62 tctcaaacaaaagaaaacaaaacaaaaaccagagagagagagagagagagagagagagag 121
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 872 tctcaaacaaaagaaaacaaaacaaaaacc--agagagagagagagagagagagagagag 815
Query: 122 agagaataaacaaaataaatctgaaagatttgcttcctttcgtttgctttcctttacttt 181
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 agagaataaacgaaataaatctgaaagatttgcttcctttcgtttgctttcctttacttt 755
Query: 182 ggaaataagaacaaggttcatgcttatagccttaagagggagacaagaaatacacaaata 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 ggaaataagaacaaggttcatgcttatagccttaagagggagacaagaaatacacaaata 695
Query: 242 atcaacgtatctctctgtgaatatgaatattcaaatgcacaaatacatataatatatgca 301
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 atcaacgtacctctctgtgaatatgaatattcaaatgcacaaatacatataatatatgca 635
Query: 302 tatatacagatatatgcattactataaattgctgtcatatgcatacatattttgtgtatg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 tatatacagatatatgcattactataaattgctgtcatatgcatacatattttgtgtatg 575
Query: 362 cttctgtttgtattcaccagataacaggaagcaattaacaattttaaacaagaaataaag 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 cttctgtttgtattcaccagataacaggaagcaattaacaattttaaacaagaaataaag 515
Query: 422 aaaagacatgcgtttccccactccccaaaaagcacatcccatgtcatacattaaagggaa 481
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 514 aaaagacatgcgtttccccgctccccaaaaagcacatcccatgtcatacattgaagggaa 455
Query: 482 aatcaaatatagggccacagcagggaaaggagctgtcctttgggcctatgtggcctcctc 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 aatcaaatatagggccacagcagggaaaggagctgtcctttgggcctatgtggcctcctc 395
Query: 542 gcctcctttctaaagcagggtgcatattggagatctgctgagagctcctgttcccttaga 601
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 394 gcctcctttctaaagcagggtgcatattggagatctgctgagagctcttgttcccttaga 335
Query: 602 tttcacct 609
||||||||
Sbjct: 334 tttcacct 327
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1009
Length adjustment: 10
Effective length of query: 599
Effective length of database: 999
Effective search space: 598401
Effective search space used: 598401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
