Query= MSMg01no315_j21.b1 MSMg01no315_j21.b1 CHROMAT_FILE:
MSMg01no315_j21.b1 PHD_FILE: MSMg01no315_j21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:09 2005
(375 letters)
>mm_chr16_73680130_73680904
Length = 775
Score = 644 bits (333), Expect = 0.0
Identities = 363/373 (97%), Gaps = 3/373 (0%)
Strand = Plus / Minus
Query: 4 ggaattctctgtcgtctac-gccttgcgacatg-ttttttccaatgtaatatttttattg 61
|||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 774 ggaattctctgtcgtc-acagccttgcgacatgtttttttccaatgtaatatttttattg 716
Query: 62 attatttgagaatttcatacaatgcatcatcggttcacactcaacctacccttgtgtccc 121
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 attatttaagaatttcatacaatgcatcatcggttcacactcaacctacccttgtgtccc 656
Query: 122 accccacgattaaaaaatataccaagtacaattggtgccacccccatgctcacctgagcg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 accccacgattaaaaaatataccaagtacaattggtgccacccccatgctcacctgagcg 596
Query: 182 cggtcaaactccccgtggccactgggatttcttgtgacatttaactcacttgattttcat 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 cggtcaaactccccgtggccactgggatttcttgtgacatttaactcacttgattttcat 536
Query: 242 ccaggaatcactattgccctgacctggattgcaatgattatttgaaagctgattatctac 301
||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||
Sbjct: 535 ccaggaatcactattgccctggcctggattgcagtgatgatttgaaagctgattatctac 476
Query: 302 acattgcctatgctttcttttctccctgccccgtgcatcagcatttgccctgaatgatcc 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 475 acattgcctatgctttcttttctccctgccccgtgcatcagcatttgccctgaattatcc 416
Query: 362 cccgttccttccc 374
|| || |||||||
Sbjct: 415 ccggtcccttccc 403
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 775
Length adjustment: 9
Effective length of query: 366
Effective length of database: 766
Effective search space: 280356
Effective search space used: 280356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no315_j21.g1 MSMg01no315_j21.g1 CHROMAT_FILE:
MSMg01no315_j21.g1 PHD_FILE: MSMg01no315_j21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:09 2005
(343 letters)
>mm_chr16_73492468_73493205
Length = 738
Score = 605 bits (313), Expect = e-177
Identities = 334/343 (97%), Gaps = 5/343 (1%)
Strand = Plus / Plus
Query: 1 cttctcacgacttcacatctgcttgttgattgttgatttctcctaagtatgtcaccctta 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 cttctcacgacttcacatctgcttgctgattgttgatttctcctaagtatgtcaccctta 260
Query: 61 cagagctctgcttgtcctgcttgttgacatttccaatttaaaaaaaaaaatctatttgac 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 cagagctctgcttgtcctgcttgttgacatttccaatttaaaaaaaaaa-tctatttgac 319
Query: 121 atttcaaacttagaatgttcacagtgaagatcctcatcttactttgtttctgcgtcaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atttcaaacttagaatgttcacagtgaagatcctcatcttactttgtttctgcgtcaaca 379
Query: 181 aatagtgatggcatccacacggtatttgggcttaagcgcccaaaatcatttgtttcaaat 240
|||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 380 aatagtgatggcatccacacagtatt----cttaagcgcccaaaatcatttgtttcaaat 435
Query: 241 tcattccccctactcaaaacttacgatggtattctgttaatgaagtgattgttaaaacta 300
||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 436 tcattccccctacacaaaacttactatggtattctgttaatgaagtgattgttaaaacta 495
Query: 301 tccctctctccttaataccccttgagaaagtcacaagtttaat 343
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tccctctctccttaataccccttgagaaagtcacaagtttaat 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 738
Length adjustment: 9
Effective length of query: 334
Effective length of database: 729
Effective search space: 243486
Effective search space used: 243486
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
