Query= MSMg01no315_n22.b1 MSMg01no315_n22.b1 CHROMAT_FILE:
MSMg01no315_n22.b1 PHD_FILE: MSMg01no315_n22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:28 2005
(345 letters)
>mm_chr16_12516806_12517550
Length = 745
Score = 636 bits (329), Expect = 0.0
Identities = 338/341 (99%)
Strand = Plus / Plus
Query: 1 gaaaaaaatgactgacgcacacatctgaacaattcagggcttatgctaacatggagttac 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaaaaaaatgactgacgcacacatctgaacaattcagggcttatgctaacatggagttat 260
Query: 61 gtgggctcggttgcaatgcaatgaataatgaagtgcgggaccacatgcattctaattgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgggctcggttgcaatgcaatgaataatgaagtgcgggaccacatgcattctaattgcc 320
Query: 121 tcattgcaggctctgtccctcagctcaaacacagttgaagataaacagtaagcagttcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcattgcaggctctgtccctcagctcaaacacagttgaagataaacagtaagcagttcct 380
Query: 181 ctgtgacaagaaattacatctgatccctgcttatgttatcaggaaagtacatagtaagtg 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 ctgtgacaagaaattacatctgatccctgcttatgttatcagcaaagtacatagtaagtg 440
Query: 241 ccaaattaatgcttgtttactaaatacaaggatgaatgagctgtaaattctactactaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccaaattaatgcttgtttactaaatacaaggatgaatgagctgtaaattctactactaga 500
Query: 301 tggggacctatatcctccatctctcttctcagtgatgaggc 341
||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 tggggacctatatcctccatctctcttcttagtgatgaggc 541
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no315_n22.g1 MSMg01no315_n22.g1 CHROMAT_FILE:
MSMg01no315_n22.g1 PHD_FILE: MSMg01no315_n22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:28 2005
(194 letters)
>mm_chr16_12678610_12679203
Length = 594
Score = 317 bits (164), Expect = 2e-91
Identities = 190/206 (92%), Gaps = 12/206 (5%)
Strand = Plus / Minus
Query: 1 gtgactttagtaagactaggctttgtgaagtggtgtggagaaaagacacgggatatgaga 60
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gtgaccttagtaagaataggctttgtgaagtggtgtggagaaaagacacgggatatgaga 300
Query: 61 acaaggtgttttactgtaaatagagaggataaatgaggtggggagtagaaacacataaga 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 299 acaaggtgttttactgtaaatagagaggataaatgaggtgaggagtagaaacacataaga 240
Query: 121 cagtgaaggagggatgttgaagttttggagtattgggt------------agatgcatga 168
|||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 239 cagtgaaggagggatgttgaagttttggagtattgggtaattgtccatgcagatgcatga 180
Query: 169 cgacctgcgttcagaccccaacaccc 194
|||||||||||||||| |||||||||
Sbjct: 179 cgacctgcgttcagacaccaacaccc 154
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space: 108996
Effective search space used: 108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
