Query= MSMg01no318_g10.b1 MSMg01no318_g10.b1 CHROMAT_FILE:
MSMg01no318_g10.b1 PHD_FILE: MSMg01no318_g10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:34 2005
(374 letters)
>mm_chr16_81436741_81437519
Length = 779
Score = 596 bits (308), Expect = e-174
Identities = 354/372 (95%), Gaps = 5/372 (1%)
Strand = Plus / Plus
Query: 5 gaattcagagttgtcgcgggaagttgaattacaggacaacaaatatcacaatcaagaatg 64
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagagttgaagtgggaagttgaattacaggacaacaaatatcacaatcaagaatg 264
Query: 65 tcttaatttccgtcatatgtgcttattgtgcgtggcactgttatacaaagactcttggac 124
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 265 tcttaatttccgtcatatgtgcttattgtgcatggcactgttatacaaagacccttggac 324
Query: 125 acaagtacataattagaccagacacatctccaccatactcataactcttgaatcattcag 184
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 325 acaagtacacaattagaccagacacatctccaccatactcataacccttgaatcattcag 384
Query: 185 tttccacctactcacccagtagcccctctgctctgctttgtgatttctcttcaataatat 244
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttccacccactcacccagtagcccctctgctctgctttgtgatttctcttcaataatat 444
Query: 245 cacgttacatacatgattttatttgtgacaaaatactgtaagccatgatgtaaaagcaaa 304
||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 445 cacattacatacatgatttgatttgtggcaaaatactgtaagccatgatgtaaaagcaaa 504
Query: 305 caaaatcttgggatccactttttttttt-----ctagctaccatctgtgctaaaagtaaa 359
||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 505 gaaaatcttgggatccactttttttttttgtttccagctaccatctgtgctaaaagtaaa 564
Query: 360 atatttgtcacc 371
||||||||||||
Sbjct: 565 atatttgtcacc 576
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 779
Length adjustment: 9
Effective length of query: 365
Effective length of database: 770
Effective search space: 281050
Effective search space used: 281050
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no318_g10.g1 MSMg01no318_g10.g1 CHROMAT_FILE:
MSMg01no318_g10.g1 PHD_FILE: MSMg01no318_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:34 2005
(288 letters)
>mm_chr16_81594264_81594951
Length = 688
Score = 540 bits (279), Expect = e-158
Identities = 285/287 (99%)
Strand = Plus / Minus
Query: 1 tataaaactatttttattcaatattcaagtgaataatttttctcatttattcatttataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tataaaactatttttattcaatattcaagtgaataatttttctcatttattcatttataa 341
Query: 61 tttaataattcatgtataatttatacatcatattaaaatggagttgactccataatattg 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 340 tttaataattcatgtataatttatacatcatattaaaatggagttggctccataatattg 281
Query: 121 taaagacatatagttcattttgtatgttctgtttccccatatacaaaaagacatatcttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 taaagacatatagttcattttgtatgttctgtttccccatatacaaaaagacatatcttc 221
Query: 181 aaaataagctatccttaatcaaaataatgtatattataatttaaaaatctatttttaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 aaaataagctatccttaatcaaaataatgtatattataatttaaaaatctatttttaaag 161
Query: 241 tcaggtccataaactatagagaaatacacggttaccaatatatatac 287
|||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 tcaggttcataaactatagagaaatacacggttaccaatatatatac 114
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
