Query= MSMg01no319_b07.b1 MSMg01no319_b07.b1 CHROMAT_FILE:
MSMg01no319_b07.b1 PHD_FILE: MSMg01no319_b07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:22 2005
(323 letters)
>mm_chr16_11678409_11679131
Length = 723
Score = 569 bits (294), Expect = e-166
Identities = 312/318 (98%)
Strand = Plus / Plus
Query: 5 ggaattcacttacctattccgttgtctgtgttctgtatgcattgcagctagccatactgt 64
||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 205 ggaattcacttacctatactgttgtctgtgttctgtacgcattgcagctagccatactgt 264
Query: 65 tactgatcactttgtatccgtgtgcaagcacatttttaaatgtgaatatgtatgcatctt 124
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tactgatcactttgtatgcgtgtgcaagcacatttttaaatgtgaatatgtatgcatctt 324
Query: 125 tctctcttgctctccactttgtatttagagatggggtctcatcctgaatccagagctcat 184
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 325 tctctcttgctctccactttgtatttagagatggggtctcatcttgaatccagagctcat 384
Query: 185 ttgtttggctagattgtttggttagtgagccctgaagatcttgctcagtgctagatggac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttgtttggctagattgtttggttagtgagccctgaagatcttgctcagtgctagatggac 444
Query: 245 acacaccaccacatccacttttccatgggtgctgccgagcacatcccaggtcctcatgct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acacaccaccacatccacttttccatgggtgctgccgagcacatcccaggtcctcatgct 504
Query: 305 tgcacagtggtcacttta 322
|||||||||| |||||||
Sbjct: 505 tgcacagtgggcacttta 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no319_b07.g1 MSMg01no319_b07.g1 CHROMAT_FILE:
MSMg01no319_b07.g1 PHD_FILE: MSMg01no319_b07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:22 2005
(249 letters)
>mm_chr16_11852412_11853060
Length = 649
Score = 383 bits (198), Expect = e-111
Identities = 244/278 (87%), Gaps = 30/278 (10%)
Strand = Plus / Minus
Query: 1 tcttgctctgtgatattggcagtctatgattgtctgtagtcaccctgtgcgcagtaacat 60
||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 308 tcttgctctgtgatattggcagtctgtgattgtctgtagtcaccctgtgtgcagtaacat 249
Query: 61 gctaaaattctgcgcccctgtgtgacagtgatgctgactgcagcagac----------ta 110
|||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 248 gctaaaattctgcgcccctgtgtgacagtgatgctgactgcagcagaccacccatgagta 189
Query: 111 tcc--------------------catctgcggtgcagccacacatcagggcctttagaga 150
||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 188 tcctggtagattaaaacaggagacatctgtggtgcagccacacatcagggcctttagaga 129
Query: 151 tacagggtctggctcactttgatcatcagccactgtgggcaaattggttttcctctttct 210
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 128 tacagggtctggctcactttgatcatccgccactgtgggcaaattggttttcctctttct 69
Query: 211 ccttgtctcatggcccaaagatggccaggaaggcagac 248
||||||||||||||||||||||||||||||||||||||
Sbjct: 68 ccttgtctcatggcccaaagatggccaggaaggcagac 31
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
