Query= MSMg01no319_d03.b1 MSMg01no319_d03.b1 CHROMAT_FILE:
MSMg01no319_d03.b1 PHD_FILE: MSMg01no319_d03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:30 2005
(239 letters)
>mm_chr16_65640882_65641520
Length = 639
Score = 460 bits (238), Expect = e-134
Identities = 238/238 (100%)
Strand = Plus / Minus
Query: 1 caatggggtgttattttgatactgatctgtggactgatctgtgtgccttccatcttagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 caatggggtgttattttgatactgatctgtggactgatctgtgtgccttccatcttagta 379
Query: 61 atcactgtttcctgtaccccattttcatggactggtcacctttgaaacacactggccatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 atcactgtttcctgtaccccattttcatggactggtcacctttgaaacacactggccatg 319
Query: 121 tcctgactgcatcttgcacaaacatcctcttattagagaaccaactcttgaaaaatatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tcctgactgcatcttgcacaaacatcctcttattagagaaccaactcttgaaaaatatgt 259
Query: 181 tgttagaaaaaaaatgtattttaccagagcttaacatttgcccaagagttatgattaa 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tgttagaaaaaaaatgtattttaccagagcttaacatttgcccaagagttatgattaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no319_d03.g1 MSMg01no319_d03.g1 CHROMAT_FILE:
MSMg01no319_d03.g1 PHD_FILE: MSMg01no319_d03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:30 2005
(345 letters)
>mm_chr16_65478642_65479386
Length = 745
Score = 580 bits (300), Expect = e-170
Identities = 333/344 (96%), Gaps = 1/344 (0%)
Strand = Plus / Plus
Query: 1 tgtatttaatcgtggcattcttttgcaggttcacttggatcctctgtatgcctccaacaa 60
|||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct: 201 tgtatttaatcgtggcattcttttgctggttcacttggatcctctgtatgcatccaacaa 260
Query: 61 tcctacctgaaaccttgtattttactatcttgatctaattgaatttaaagatgtaaactt 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 261 tcctacctgaaaccttgtattttactatcttgatctaattgaacttaaagatgtaaaatt 320
Query: 121 gtaaattataagctgggcattggtggtgcacacctttaatcccagcacttgggaggcaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtaaattataagctgggcattggtggtgcacacctttaatcccagcacttgggaggcaga 380
Query: 181 gggaggtggatttctaagtttgaggccagcctggtctacagagcgagtttcaggacagcc 240
|| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 ggcaggtggacttctaagtttgaggccagcctggtctacagagtgagtttcaggacagcc 440
Query: 241 agggctacacatagaaaccctgtcttaaaaaaccaccaccaacaaaaaat-ataaaatat 299
||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 441 agggctacacagagaaaccctgtcttaaaaaaccaccaccaacaaaaaattataaattat 500
Query: 300 atattcttataaaagacataatgtggaagatatgttgggtatga 343
|||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 501 atattcttataaaaaacataatgtggaagatatgttgggtatga 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
