Query= MSMg01no319_p04.b1 MSMg01no319_p04.b1 CHROMAT_FILE:
MSMg01no319_p04.b1 PHD_FILE: MSMg01no319_p04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:21 2005
(374 letters)
>mm_chr16_46101759_46102538
Length = 780
Score = 576 bits (298), Expect = e-169
Identities = 359/390 (92%), Gaps = 22/390 (5%)
Strand = Plus / Plus
Query: 4 ggaattcagctacattgcgccctgaggcca-gtgacagaaggaaatcctgagggattgta 62
|||||||||||||| | ||||||||| || |||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagctacaacgtgccctgagg-catgtgacagaaggaaatcctgagggattgta 262
Query: 63 gagt-----ctccagggtcccacacctgcatttgcatcacagagcaaaaggggaagcaaa 117
|| | |||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 263 gattgggccctccaggggcccaaacctgcatttgcatcacagagcaaaaggggaagcaaa 322
Query: 118 tctagttcagagaaaccacccagtatctaaagctaggagagggggcagtgctataagcac 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tctagttcagagaaaccacccagtatctaaagctaggagagggggcagtgctataagcac 382
Query: 178 actgtgactacagcggaaaggttccgttcttattactacagctttttacttttaaactgc 237
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 actgtgactacagctgaaaggttccgttcttattactacagctttttacttttaaactgc 442
Query: 238 tatttct-tttt---------tgtaat-----tacatcacttttctcttccctttcctcc 282
||||||| |||| |||||| ||||||||||||||||||||||||||||
Sbjct: 443 tatttctcttttggtttggattgtaatataattacatcacttttctcttccctttcctcc 502
Query: 283 ctccaaagcctcccatatacccttccttgctgtttccaatttgtggcctctatttttatt 342
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 503 ctccaaagcctcccatatacccttccttgctatttccaattcgtggcctctatttttatt 562
Query: 343 attgttacacaaatatatgttcatattaca 372
||||||||||||||||||||||||||||||
Sbjct: 563 attgttacacaaatatatgttcatattaca 592
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 780
Length adjustment: 9
Effective length of query: 365
Effective length of database: 771
Effective search space: 281415
Effective search space used: 281415
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no319_p04.g1 MSMg01no319_p04.g1 CHROMAT_FILE:
MSMg01no319_p04.g1 PHD_FILE: MSMg01no319_p04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:21 2005
(342 letters)
>mm_chr16_46182116_46182857
Length = 742
Score = 613 bits (317), Expect = e-180
Identities = 335/341 (98%)
Strand = Plus / Minus
Query: 1 atcttctgtctccacactgtcagttattctgagaatttttaaggtcctgatcaaaaggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atcttctgtctccacactgtcagttattctgagaatttttaaggtcctgatcaaaaggcc 482
Query: 61 agtgacagccaaggagacgaagtatgagagtaagagactttacatctcattcttccttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agtgacagccaaggagacgaagtatgagagtaagagactttacatctcattcttccttcc 422
Query: 121 agaaaccctgccttctatgggacacctgttcataatcgccagcagcaacttgctcatcta 180
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 421 agaaaccctgccttctatgggacacgtgctcataatcgccagcagcaacttgctcatcta 362
Query: 181 tttatacattcttataatcactttttcccctcaacaagctccatcatagaagctgagcca 240
|| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 361 ttcatacattcttataatcacttttccccctcaacaagctccatcatagaagctgagcca 302
Query: 241 caccccgagttaaaaacagacatggttctcagcatcatgtaatccacatcttagccaatg 300
||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 301 cactccgagttaaaaacagacatggttctcagcatcatgaaatccacatcttagccaatg 242
Query: 301 cacttattagacattgccttcttacagcattgaataagtac 341
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cacttattagacattgccttcttacagcattgaataagtac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
