Query= MSMg01no321_f14.b1 MSMg01no321_f14.b1 CHROMAT_FILE:
MSMg01no321_f14.b1 PHD_FILE: MSMg01no321_f14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:04 2005
(189 letters)
>mm_chr16_7709356_7709944
Length = 589
Score = 366 bits (189), Expect = e-106
Identities = 189/189 (100%)
Strand = Plus / Minus
Query: 1 cccagcacagatgccttacttccttagcatttatttcaagtatgctcttctaaaccatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 cccagcacagatgccttacttccttagcatttatttcaagtatgctcttctaaaccatac 330
Query: 61 aagatatttgaataagtatagttaatacaagctccaaatttttctccagctacttcacta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 aagatatttgaataagtatagttaatacaagctccaaatttttctccagctacttcacta 270
Query: 121 cacatttttgtttattttatcttttttctgtttctagttcttttgtgtcactggcaccta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 cacatttttgtttattttatcttttttctgtttctagttcttttgtgtcactggcaccta 210
Query: 181 tttttgttt 189
|||||||||
Sbjct: 209 tttttgttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 589
Length adjustment: 8
Effective length of query: 181
Effective length of database: 581
Effective search space: 105161
Effective search space used: 105161
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no321_f14.g1 MSMg01no321_f14.g1 CHROMAT_FILE:
MSMg01no321_f14.g1 PHD_FILE: MSMg01no321_f14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:04 2005
(289 letters)
>mm_chr16_7535032_7535720
Length = 689
Score = 526 bits (272), Expect = e-154
Identities = 284/288 (98%)
Strand = Plus / Plus
Query: 1 cgtccttgggaactgcaattctttgttgtatacattacaattctcacatcccgagtctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 cgtccttgggaactgcaattctttgttgtatacattacaattctcacatgaggagtctgt 260
Query: 61 gcctcactttgataatttggacaattttaatgataatatggagctgagtctcccagtgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcctcactttgataatttggacaattttaatgataatatggagctgagtctcccagtgtt 320
Query: 121 ctgtgtaccccttagagttgaaagtgtctgggacaagggacaaagaagaaaggtcagtgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgtgtaccccttagagttgaaagtgtctgggacaagggacaaagaagaaaggtcagtgg 380
Query: 181 tgacctgcagtggacagctgaagagacatggttagctcttagcacttgcagtatttttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgacctgcagtggacagctgaagagacatggttagctcttagcacttgcagtatttttca 440
Query: 241 aacagggtttccatgttatgcttggaaaagaaaatttcaatgacttca 288
||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aacagggcttccatgttatgcttggaaaagaaaatttcaatgacttca 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
