Query= MSMg01no322_e02.b1 MSMg01no322_e02.b1 CHROMAT_FILE:
MSMg01no322_e02.b1 PHD_FILE: MSMg01no322_e02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:11 2005
(548 letters)
>mm_chr16_18277643_18278590
Length = 948
Score = 1021 bits (528), Expect = 0.0
Identities = 543/548 (99%)
Strand = Plus / Plus
Query: 1 aattcaagcacattacaaagatctttaacaacagtcagaagccaccaagacagaccagag 60
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattcaagcacagcagaaagatctttaacaacagtcagaagccaccaagacagaccagag 260
Query: 61 aagacaagaaaagggggaaggggaaattggggcaaactcaaaggaaaagctgagcaatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagacaagaaaagggggaaggggaaattggggcaaactcaaaggaaaagctgagcaatcc 320
Query: 121 cccctctcaagacaagggtcagtgatgtgaaaataagactccacctgcaccacacttctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccctctcaagacaagggtcagtgatgtgaaaataagactccacctgcaccacacttctc 380
Query: 181 tctctccttgccttgcttgtccatccaacccagcgggtccaatgcactcactcccacctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctctccttgccttgcttgtccatccaacccagcgggtccaatgcactcactcccacctc 440
Query: 241 cagctggaaccaaagtgatgtatgaggaataaaacgggtttgaacttaccacattcaaag 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagctgggaccaaagtgatgtatgaggaataaaacgggtttgaacttaccacattcaaag 500
Query: 301 aaattataaacagggcggaccttgaggacacgctgcatgtattcgtgcaggatgcaaacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaattataaacagggcggaccttgaggacacgctgcatgtattcgtgcaggatgcaaacc 560
Query: 361 tcagacttcccactgggattgatgacaaactctgtgacaaaaagaactatctcaggtaaa 420
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcagacttcccattgggattgatgacaaactctgtgacaaaaagaactatctcaggtaaa 620
Query: 421 ctcaggaactcgatctacatgagtcattcattaggggcttaccacagtgaacatggtagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctcaggaactcgatctacatgagtcattcattaggggcttaccacagtgaacatggtagc 680
Query: 481 ctctgcattacaactcataaacacagactaagcagacatgacaagaacatgttccatctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctctgcattacaactcataaacacagactaagcagacatgacaagaacatgttccatctg 740
Query: 541 ttgatgta 548
||||||||
Sbjct: 741 ttgatgta 748
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space: 504644
Effective search space used: 504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no322_e02.g1 MSMg01no322_e02.g1 CHROMAT_FILE:
MSMg01no322_e02.g1 PHD_FILE: MSMg01no322_e02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:11 2005
(469 letters)
>mm_chr16_18437150_18438017
Length = 868
Score = 845 bits (437), Expect = 0.0
Identities = 461/469 (98%), Gaps = 1/469 (0%)
Strand = Plus / Minus
Query: 1 tggatgagatgggaggagacgatcacataaagctgaagagaagtaactacctaagtggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 867 tggatgagatgggaggagacgatcacataaagctgaagagaagtaactagctaagtggtg 808
Query: 61 ggacttggaatagaataaagtattgaaattaagagacagtcagggagcaagttaaggttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 ggacttggaatagaataaagtattgaaattaagagacagtcagggagcaagttaaggttt 748
Query: 121 ttggcccaggcatttattcatacataagaagtctcagagtcattattctgggatcaaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 ttggcccaggcatttattcatacataagaagtctcagagtcattattctgggatcaaaga 688
Query: 181 ggaggccgggtggaaaagctcacggttacagatgagtggcagagagcaaacctctccttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ggaggccgggtggaaaagctcacggttacagatgagtggcagagagcaaacctctccttt 628
Query: 241 caatgggacccgcccgagggcaagggcttctctctcaccagttgtgttggataggctggg 300
|||||||||| | | |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 627 caatgggacctg-cagagggcaagggcttctctctcaccagttgtgttggacaggctggg 569
Query: 301 ccacctcccagccatagtggtgagcatctctgatcatgccccccaccaccgcagcctgat 360
||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 568 ccacctcccagccatagtggtgagcatctctgatcatgccccccagcagtgcagcctgat 509
Query: 361 gcatcagcttcttgggtatgcaacccacgttgacacaggtgccaccaaggccccacttgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 gcatcagcttcttgggtatgcaacccacgttgacacaggtgccaccaaggccccacttgg 449
Query: 421 tgcctagaatatcagaaaagcatgtatgtatgtgtatggtaatatgtgt 469
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tgcctagaatatcagaaaagcatgtatgtatgtgtatggtaatatgtgt 400
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 868
Length adjustment: 10
Effective length of query: 459
Effective length of database: 858
Effective search space: 393822
Effective search space used: 393822
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
