Query= MSMg01no327_d10.b1 MSMg01no327_d10.b1 CHROMAT_FILE:
MSMg01no327_d10.b1 PHD_FILE: MSMg01no327_d10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:04 2005
(373 letters)
>mm_chr16_28726655_28727427
Length = 773
Score = 652 bits (337), Expect = 0.0
Identities = 365/377 (96%), Gaps = 8/377 (2%)
Strand = Plus / Minus
Query: 5 gaattccacaatgattcccagatgactctgctctgctcccaggagccaggaataaatgtg 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gaattccacaatgagtcccagatgactctgctctgctcccaggagccaggaataaatgtg 481
Query: 65 tgggagaatgtcttgcagctttctttattgaacagcctttcttgggatagattcttctca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 tgggagaatgtcttgcagctttctttattgaacagcctttcttgggatagattcttctca 421
Query: 125 ctcatcaggagtggtaatatccacataggtagtgctttgtgagagccatgactaacattg 184
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 420 ctcatcaggagtggtaatatccacataggtagcgctttgtgagagccatgactaacattg 361
Query: 185 actcatcgctgttgaatatactgagcatgtggaggaaagagcagggcagggcagatatgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 actcatcgctgttgaatatactgagcatgtggaggaaagagcagggcagggcagatatgt 301
Query: 245 ccaaaccgattgtctggttgtggtaaatgctagtgtatgacaaaatgatagggctataaa 304
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 300 ccaaaccgattgtctggttgtggtaaatgctagtatatgacaaaatgatagggctataaa 241
Query: 305 cagcaggaatgctgttttgtctgccattccc-cccc-cccaa-----aatctggcag-ta 356
||||||||||||||||||||||||||||||| |||| ||| | |||||||||| ||
Sbjct: 240 cagcaggaatgctgttttgtctgccattcccaccccaccccacccccaatctggcagata 181
Query: 357 caaatcttgaaaccaga 373
|||||||||||||||||
Sbjct: 180 caaatcttgaaaccaga 164
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no327_d10.g1 MSMg01no327_d10.g1 CHROMAT_FILE:
MSMg01no327_d10.g1 PHD_FILE: MSMg01no327_d10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:04 2005
(254 letters)
>mm_chr16_28567317_28567970
Length = 654
Score = 480 bits (248), Expect = e-140
Identities = 251/252 (99%)
Strand = Plus / Plus
Query: 1 actttaatggtgctatgatgtataaaaagagaacaaatacacaccatagaagccagggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actttaatggtgctatgatgtataaaaagagaacaaatacacaccatagaagccagggaa 260
Query: 61 gtggttgactagtttggacaaaaactttcaagtgttctttctgtgcatttctaaattaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtggttgactagtttggacaaaaactttcaagtgttctttctgtgcatttctaaattaaa 320
Query: 121 cttggaagttctgtggcaatggtatcttacttaaaatgcaacacacatagttgtcttgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttggaagttctgtggcaatggtatcttacttaaaatgcaacacacatagttgtcttgat 380
Query: 181 ggctaaatattaagttatattttctgtttccggttagggttttttatagttttctatgct 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 ggctaaatattaagttatattttctgtttccggatagggttttttatagttttctatgct 440
Query: 241 ttctattttcta 252
||||||||||||
Sbjct: 441 ttctattttcta 452
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 254
Length of database: 654
Length adjustment: 9
Effective length of query: 245
Effective length of database: 645
Effective search space: 158025
Effective search space used: 158025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
