Query= MSMg01no333_l05.b1 MSMg01no333_l05.b1 CHROMAT_FILE:
MSMg01no333_l05.b1 PHD_FILE: MSMg01no333_l05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:56 2005
(683 letters)
>mm_chr16_6655244_6656326
Length = 1083
Score = 1295 bits (670), Expect = 0.0
Identities = 676/678 (99%)
Strand = Plus / Plus
Query: 6 gatttatgctgattatcagctcttcctgggaaatggcctccatgtctagataacttttat 65
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gatttatgctgataattagctcttcctgggaaatggcctccatgtctagataacttttat 265
Query: 66 tttttccgacagtcatctccataatgagctattagtctacaggccagaaacaaaggaatg 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tttttccgacagtcatctccataatgagctattagtctacaggccagaaacaaaggaatg 325
Query: 126 gagaaggaaggaaggacctcgggctgtggggtccttattttgtcttgaaatcctcattca 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gagaaggaaggaaggacctcgggctgtggggtccttattttgtcttgaaatcctcattca 385
Query: 186 tttaaaaccaaatgtgaccatgctcccttttataggggttcattgctctaacttgcaaac 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tttaaaaccaaatgtgaccatgctcccttttataggggttcattgctctaacttgcaaac 445
Query: 246 gcaactcaaaagcaggaaagctgagctcttacttgtcttagtaatggcttctggagttta 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gcaactcaaaagcaggaaagctgagctcttacttgtcttagtaatggcttctggagttta 505
Query: 306 gatagagcatgcattctgccatactcatcctcactgggctccaactacacagagagggat 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gatagagcatgcattctgccatactcatcctcactgggctccaactacacagagagggat 565
Query: 366 gtcaacatttgcacacttactagcttggaagagtaagcagagggagggagagatcatcag 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gtcaacatttgcacacttactagcttggaagagtaagcagagggagggagagatcatcag 625
Query: 426 cctgttttatgcacaagtcatcagagacggatggtggagccagtataagagaaacaggat 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 cctgttttatgcacaagtcatcagagacggatggtggagccagtataagagaaacaggat 685
Query: 486 aattattgaaagacttattacagaatatatgacacaaaaagtgctacacacagggcatgg 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 aattattgaaagacttattacagaatatatgacacaaaaagtgctacacacagggcatgg 745
Query: 546 ccacacttcaaggtcatcagaaacaggatattgactgtaaggcatcctccccctcttgct 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 ccacacttcaaggtcatcagaaacaggatattgactgtaaggcatcctccccctcttgct 805
Query: 606 tgacacgtattacctgttttccatggcctctggaaaaccctgtaccctcaaactcatctt 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 tgacacgtattacctgttttccatggcctctggaaaaccctgtaccctcaaactcatctt 865
Query: 666 gctgcttctggaagttac 683
||||||||||||||||||
Sbjct: 866 gctgcttctggaagttac 883
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1083
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1073
Effective search space: 722129
Effective search space used: 722129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no333_l05.g1 MSMg01no333_l05.g1 CHROMAT_FILE:
MSMg01no333_l05.g1 PHD_FILE: MSMg01no333_l05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:56 2005
(655 letters)
>mm_chr16_6690857_6691911
Length = 1055
Score = 1259 bits (651), Expect = 0.0
Identities = 654/655 (99%)
Strand = Plus / Minus
Query: 1 atagaatctcactgatcctttgaaaaaaatgctagttcaagccctgtgatggttagatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1035 atagaatctcactgatcctttgaaaaaaatgctagttcaagccctgtgatggttagatta 976
Query: 61 cagctataaattttcttctgtttgattgttttgtttaatttttttgtgctgctgaggatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975 cagctataaattttcttctgtttgattgttttgtttaatttttttgtgctgctgaggatg 916
Query: 121 gaacccatgattttgcatatgttaaggaagtcctttactactgattgacagctcaagctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915 gaacccatgattttgcatatgttaaggaagtcctttactactgattgacagctcaagctc 856
Query: 181 acagggaggaaagttcaatgaaaccaggcacttgttcactatgcaagtgagcagtgtagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 acagggaggaaagttcaatgaaaccaggcacttgttcactatgcaagtgagcagtgtagg 796
Query: 241 ccactgggagagctggcggggtgaggatctgctcacaggtctggattggtatcgctccta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 ccactgggagagctggcggggtgaggatctgctcacaggtctggattggtatcgctccta 736
Query: 301 ctgttcaatgactcagaacacatctggatgttgcttgtataacaacaactaagcattatc 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 735 ctgttcaatgactcagaacacatctggatgttgcttgtataacaataactaagcattatc 676
Query: 361 aatgaagatgaagataggtgaatgttttgagtaagactcacgcctattaagcatgacaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 aatgaagatgaagataggtgaatgttttgagtaagactcacgcctattaagcatgacaat 616
Query: 421 aatggaagtaaacataaagcccgtggtgtttggtatttttgtccagtatggtaaccagcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 aatggaagtaaacataaagcccgtggtgtttggtatttttgtccagtatggtaaccagcc 556
Query: 481 tcaataggaggaaaagtacagtgtaatgtcgccttgtggaatcggtctgcagagtccttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tcaataggaggaaaagtacagtgtaatgtcgccttgtggaatcggtctgcagagtccttt 496
Query: 541 gtcatccatggaggagaggctttaagaacagtaagaggttatgtgctcgtgcactgacag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gtcatccatggaggagaggctttaagaacagtaagaggttatgtgctcgtgcactgacag 436
Query: 601 taagttccagaaaaagtcctatgtgctccgcacaggaacaaatttaagtgcttaa 655
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 taagttccagaaaaagtcctatgtgctccgcacaggaacaaatttaagtgcttaa 381
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space: 674025
Effective search space used: 674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
