Query= MSMg01no334_i03.b1 MSMg01no334_i03.b1 CHROMAT_FILE:
MSMg01no334_i03.b1 PHD_FILE: MSMg01no334_i03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:57 2005
(398 letters)
>mm_chr16_57847378_57848176
Length = 799
Score = 694 bits (359), Expect = 0.0
Identities = 386/401 (96%), Gaps = 13/401 (3%)
Strand = Plus / Plus
Query: 2 gtgccctggtccagccactcatccctaaagccctttccactccccaaatgtttaagtagc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gtgccctggtccagccactcatccctaaagccctttccactccccaaatgtttaagtagc 261
Query: 62 ctttcttttctctgttaaaccagctatctcactgaag-ttcctcctgaaagtttgttctt 120
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 262 ttttcttttctctgttaaaccagctatctcactgaaggttcctcctgaaagtttgttctt 321
Query: 121 ccccagtcacagctacctcaagtctctaaagctcctagctgttcctgccttgtttccccc 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ccccagtcacagctacctgaagtctctaaagctcctagctgttcctgccttgtttccccc 381
Query: 181 ttacaggactcatctgatcatgctaggacaaagcagagcttgaatgccataaatgatgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ttacaggactcatctgatcatgctaggacaaagcagagcttgaatgccataaatgatgta 441
Query: 241 aaatttta------tttcacttatgataaaaacatttaaattgaaaaaaaaaatcagagg 294
||| | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aaa----acagaact--cacttatgataaaaacatttaaattgaaaaaaaaaatcagagg 495
Query: 295 tttatttctcacatttttcaagacttagaagtccaaggttgaggaggagcctgcatctag 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tttatttctcacatttttcaagacttagaagtccaaggttgaggaggagcctgcatctag 555
Query: 355 cagggccttcttggtacatagcctatggtagaaagtctgaa 395
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 cagggccttcttggtacatagcctatggtagaaagtctgaa 596
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 398
Length of database: 799
Length adjustment: 9
Effective length of query: 389
Effective length of database: 790
Effective search space: 307310
Effective search space used: 307310
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no334_i03.g1 MSMg01no334_i03.g1 CHROMAT_FILE:
MSMg01no334_i03.g1 PHD_FILE: MSMg01no334_i03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:57 2005
(249 letters)
>mm_chr16_57980723_57981372
Length = 650
Score = 451 bits (233), Expect = e-131
Identities = 245/249 (98%), Gaps = 1/249 (0%)
Strand = Plus / Minus
Query: 1 ctcttagttgagggaaataccaaaaaaagaaaaa-cttaaaatgtattccaaggcaatgc 59
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 449 ctcttagttgaggaaaataccaaaaaaagaaaaatcttaaaatgtattccaaggcaatgc 390
Query: 60 taaaattcaaggagaggtggaaagtatatgacacatccaacctaatatatagcacattag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 taaaattcaaggagaggtggaaagtatatgacacatccaacctaatatatagcacattag 330
Query: 120 gatgtaatgcatcttaataacaaactaatttgtactatgtacttatcctatatcaagctt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gatgtaatgcatcttaataacaaactaatttgtactatgtacttatcctatatcaagctt 270
Query: 180 tgtgctaagttccgtgtccaattaaacctgtgtattctgatgggaaaatgccattgttat 239
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tgtgctaagttctgtgtctaattaaacctgtgtattctgatgggaaaatgccattgttat 210
Query: 240 ctagattta 248
|||||||||
Sbjct: 209 ctagattta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 650
Length adjustment: 9
Effective length of query: 240
Effective length of database: 641
Effective search space: 153840
Effective search space used: 153840
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
