Query= MSMg01no338_j21.b1 MSMg01no338_j21.b1 CHROMAT_FILE:
MSMg01no338_j21.b1 PHD_FILE: MSMg01no338_j21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:17 2005
(571 letters)
>mm_chr16_63368141_63369112
Length = 972
Score = 1067 bits (552), Expect = 0.0
Identities = 564/568 (99%), Gaps = 1/568 (0%)
Strand = Plus / Minus
Query: 5 gaattccagacaactaacccaagaatatggacttaagtgggaaaaagaagaattcagtca 64
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 gaattccagacaacgaagccaagaatatggacttaagtgggaaaaagaagaattcagtca 713
Query: 65 tgtcctaagaatgaaaatttccatgaagaaaatcttgtaatgattcacattttataatgc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 tgtcctaagaatgaaaatttccatgaagaaaatcttgtaatgattcacattttataatgc 653
Query: 125 ctacagaatgcattcaagcactattagaaaacacatgattgtattagcaga-caaattaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 652 ctacagaatgcattcaagcactattagaaaacacatgattgtattagcagaccaaattaa 593
Query: 184 tgatttagacatttgcttacaatataacatatgtaaacttttacaaagctatattaacat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 tgatttagacatttgcttacaatataacatatgtaaacttttacaaagctatattaacat 533
Query: 244 atataaacattaacataatcatgcttacagttctaaagaggcaaatgtgttacaaaataa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 atataaacattaacataatcatgcttacagttctaaagaggcaaatgtgttacaaaataa 473
Query: 304 attgtagttattgcaaatgtatgctttgctaagttttggtataaaataaatctgtaaatc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 attgtagttattgcaaatgtatgctttgctaagttttggtataaaataaatctgtaaatc 413
Query: 364 tctgaagaaataaagagaacagcatatctgctatgacaaagaatgtcttggtgtgtccct 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tctgaagaaataaagagaacagcatatctgctatgacaaagaatgtcttggtgtgtccct 353
Query: 424 gtagccctccttgggttacttctccacatatcatactgaagccctgttcaaaatgcaatg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 352 gtagccctccttgggttacttctccacatatcatactgaagccctgttcaaaatgtaatg 293
Query: 484 atatacatgtccatacatcttcttgagtggcctttgataattatgtaattcaagaatatt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 atatacatgtccatacatcttcttgagtggcctttgataattatgtaattcaagaatatt 233
Query: 544 gtatcatctagggtctcgatttttttaa 571
||||||||||||||||||||||||||||
Sbjct: 232 gtatcatctagggtctcgatttttttaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 972
Length adjustment: 10
Effective length of query: 561
Effective length of database: 962
Effective search space: 539682
Effective search space used: 539682
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no338_j21.g1 MSMg01no338_j21.g1 CHROMAT_FILE:
MSMg01no338_j21.g1 PHD_FILE: MSMg01no338_j21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:17 2005
(636 letters)
>mm_chr16_63268350_63269386
Length = 1037
Score = 1195 bits (618), Expect = 0.0
Identities = 633/638 (99%), Gaps = 3/638 (0%)
Strand = Plus / Plus
Query: 1 ccagacctgcttacatattcagaccttttactttctatttaaatctaaacctcttgtcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccagacctgcttacatattcagaccttttactttctatttaaatctaaacctcttgtcag 260
Query: 61 gatctcaaaggtggatttaagaggttagtggacctcttcccactgtgaccacattgtgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatctcaaaggtggatttaagaggttagtggacctcttcccactgtgaccacattgtgta 320
Query: 121 cattttctttttctagttttaagtattgcttgcttcactggcctgttgaggatggttggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cattttctttttctagttttaagtattgcttgcttcactggcctgttgaggatggttggt 380
Query: 181 tcagcctgatatattggggcaactagggtcccatctctgatgagtcaactcaagcatagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcagcctgatatattggggcaactagggtcccatctctgatgagtcaactcaagcatagt 440
Query: 241 actcgtctgaaagcatgttgcttgac-attcagagtagataaatatccacagctctagtg 299
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 actcgtctgaaagcatgttgcttgaccattcagagtagataaatatccacagctctagtg 500
Query: 300 attttttttttcattaagatttgatggcacatgttctgagactaggagaaaa-tatgcat 358
|||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 501 attttttttt-cattaagatttgatggcacatgttctgagactaggagaaaaatatgcat 559
Query: 359 cttggggtaaaacaaggaaaggaagattcactcgtggtcactgtaaggagacagaaacct 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cttggggtaaaacaaggaaaggaagattcactcgtggtcactgtaaggagacagaaacct 619
Query: 419 gtagaaagaagggataaccacaagagcattccttgttctagcaaaaggtattggactctt 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gtagaaagaagggataaccacaagagcattccttgttctagcaaaaggtattggactctt 679
Query: 479 catggaattaacattccagaagacagtttgaaattaatagtctaatgtatgctccataat 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 catggaattaacattccagaagacagtttgaaattaatagtctaatgtatgctccataat 739
Query: 539 tgtcaaatgtgaaaagagacctttatatggattaaatatttagaaaataaaaaaatcagt 598
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 740 tgtcaaatgtgaaaagagacctttatatggattaaatacttagaaaataaaaaaatcagt 799
Query: 599 tatgctaaaagaggaattcagttaattttttataagtg 636
|||||||||||||||||||||||||| |||||||||||
Sbjct: 800 tatgctaaaagaggaattcagttaatgttttataagtg 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1037
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1027
Effective search space: 642902
Effective search space used: 642902
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
