Query= MSMg01no340_f05.b1 MSMg01no340_f05.b1 CHROMAT_FILE:
MSMg01no340_f05.b1 PHD_FILE: MSMg01no340_f05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:19 2005
(649 letters)
>mm_chr16_46548830_46549879
Length = 1050
Score = 1228 bits (635), Expect = 0.0
Identities = 644/647 (99%), Gaps = 1/647 (0%)
Strand = Plus / Minus
Query: 4 gaattcaatgagcatcacgcttccagctgaacttgtgaagagcagtctgagtaaatgttt 63
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 gaattcaatgagcaacacgcttccagctgaacttgtgaagagcagtctgagtaaatgttt 791
Query: 64 actgtctcttttgcttttgaatatgcgctacatttaaaattagagctggaatcttgggta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 actgtctcttttgcttttgaatatgcgctacatttaaaattagagctggaatcttgggta 731
Query: 124 actcctctatgaagtactggaaattatattgtaatcaacatgtttgagtttgtgtttcct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 actcctctatgaagtactggaaattatattgtaatcaacatgtttgagtttgtgtttcct 671
Query: 184 aaccatgctgttctgtttgcatgtaaatataaagcagttagccttgtaagaagaaagcgg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 aaccatgctgttctgtttgcatgtaaatataaagcagttagccttgtaagaagaaagcgg 611
Query: 244 tataaataaatttcaccttgaaaaaaaaatgaatcatcaccccacccatttcatagcctc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 tataaataaatttcaccttgaaaaaaaaatgaatcatcaccccacccatttcatagcctc 551
Query: 304 ttgtgcatatttatggcttttttagagaatggactggagagtttagggaagtgctgtttt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 ttgtgcatatttatggcttttttagagaatggactggagagtttagggaagtgctgtttt 491
Query: 364 taaaaaataaccttaacatttaacatcactatgtcatattgatttttta-gggaagtttc 422
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 490 taaaaaataaccttaacatttaacatcactatgtcatattgattttttaggggaagtttc 431
Query: 423 ataaagccaaattgcctgtgcatgttttcctgtacgtgatatttgaaaaaaaaaatctaa 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ataaagccaaattgcctgtgcatgttttcctgtacgtgatatttgaaaaaaaaaatctaa 371
Query: 483 ctgcaaacaatgataaatgacttttgttttataattcactctttccatagcctccagtct 542
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 370 ctgcaaacaatgataaatgacttttgttttataattcactttttccatagcctccagtct 311
Query: 543 ggctgcaagggcatgaacactggtacagggacttgtaggtagatgcaaaaccaaaccaca 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ggctgcaagggcatgaacactggtacagggacttgtaggtagatgcaaaaccaaaccaca 251
Query: 603 atatagccacgggacgccccagattagattcctcactcctagcagta 649
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 atatagccacgggacgccccagattagattcctcactcctagcagta 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1050
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1040
Effective search space: 664560
Effective search space used: 664560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no340_f05.g1 MSMg01no340_f05.g1 CHROMAT_FILE:
MSMg01no340_f05.g1 PHD_FILE: MSMg01no340_f05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:19 2005
(656 letters)
>mm_chr16_46426525_46427580
Length = 1056
Score = 1234 bits (638), Expect = 0.0
Identities = 650/656 (99%), Gaps = 4/656 (0%)
Strand = Plus / Plus
Query: 1 ctggagcttgcagatgtcagaagatggcgtcagactctctggaactggagttacagatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctggagcttgcagatgtcagaagatggcgtcagactctctggaactggagttacagatgg 260
Query: 61 taggagctgccctgtaggaattggaaatgagacccaggccctttgtaagattagcacgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taggagctgccctgtaggaattggaaatgagacccaggccctttgtaagattagcacgtg 320
Query: 121 cttatagccactgaaccatctctccagccccaagaacattcgctttcctgatgtttcctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttatagccactgaaccatctctccagccccaagaacattcgctttcctgatgtttcctt 380
Query: 181 acgacaaatgttgatatgaaatagtgtatacgccaaggtgcatgccaaggttaaaataaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acgacaaatgttgatatgaaatagtgtatacgccaaggtgcatgccaaggttaaaataaa 440
Query: 241 agccaatcacagctgctataaaatgcataaatgctcacaataatcctatccaaataaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agccaatcacagctgctataaaatgcataaatgctcacaataatcctatccaaataaata 500
Query: 301 agatgaaaaaaatgatagtctgtaagaaaaatagtatttaaaacacctgaaaagatacta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agatgaaaaaaatgatagtctgtaagaaaaatagtatttaaaacacctgaaaagatacta 560
Query: 361 ttactaaaaaatatcaaagctacaattatttttattttattatattgtatatttacaata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttactaaaaaatatcaaagctacaattatttttattttattatattgtatatttacaata 620
Query: 421 tacaaaatatagatgtggcatttctggtaaactaggattagttaagcagacaacatgttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tacaaaatatagatgtggcatttctggtaaactaggattagttaagcagacaacatgttc 680
Query: 481 tacttgagtgtttgtgaatgaactgacactttaatacattatgtgtgtgtgtgtgtgtgt 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 681 tacttgagtgtttgtgaatgaactgacactttaatacattatgtgtgtgtgtgtgtgtat 740
Query: 541 gtgtgtatataaatttaaagatgacaattcattaatatcaaccaaacttctaaatatacc 600
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 at----atataaatttaaagatgacaattcattaatatcaaccaaacttctaaatatacc 796
Query: 601 tgttctttgaaacaaacttatcgtaacaattatagctgaagatacaaaataagata 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 tgttctttgaaacaaacttatcgtaacaattatagctgaagatacaaaataagata 852
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
