CTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTGAGTTGCTCTTCTGCCTGGGTGGTGTTAGCATCACAGCTGGCTCG
AAAATATGGGTTGGGAAATTATTGGCCAGATTCAAGTTTTCTGTGGGGGT
TGGCCCCTGAGATAGTTTAACAGGCAACTCTTCCTGTGGGAATTCAACCA
CTTCTTCCCCTCTGAACATCAATGGCATGGAGCCATTACTGCTTATAACA
GGACCCTCTGAGAAAGATAAGAGGACATTAACATGAAAGGAACAGAAAGG
ACACATGGGCCCACACTTAAATAACTCCCCAGACCCATGCAAAGCGTATA
AACTACTAAGTCAGAGAGCTAGAAGAGACATTCAAGTGAAAATCCAGTAT
TTATTCTATGTAATTCTTTATGTGTCCGTGTGTGTCTGTGTGTGTGTGTA
CACTGCATGCTTTTATAAGCTCACAAAGGCTGGAATAGGGTTTCAGATGC
CCTGGAACTATACAGGCAGGAGTCATGAGCTACCCCTGGGGCACCATGAA
CTGAATCCGTGGCTTATGGCAGCATTATTTAACTTTTCTCTAACATTGCC
GTCCCTCTTTCCCGTTTCCAGGGAATTTTCCCCCAACTGGTCTTTATTTT
TCTTGTAAACTTTCTTTTTTTTTTTTTTTTCTATTCTCCCTCTGCCAGAT
TACTTTTTCGCCATATATATTCCCCTCTTTATTGTTCATTTGCGCTCCGT
TTTATTCCGTTTCCTTTTCCAG

TTGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCACATTGTGGTCCAGATCATACACTGG
ACACTAAAGCACAGGAGAGACAAAAGAGAGGGGAACAGCATTGTCACTCA
GTGTTCTTCCACAGGCAGGTGTCAACTCTATGCCACCTGCATCACAGGCC
AGAGGAATCAGATTAATCTAGACACTGTGGAAACTATTCTGCAGAACAGT
CATGAAATGGCCCTCTTAAAACTTGGGCTTTGCATGGCAGGGTGGCATAC
ACCTTTAATGCCAGCACTCAGGACACAGAGGCAGGGGGATCTCTGAGTTC
GAGCCCAGCCTGGTCTACAGAGTAAGTTCTAGGACAGCCAGGGCTACACA
GAGAAACTCCATCTCAAAAACCAACCAAACAAACAAACAACCAAACAAAA
ACCTTGGACTTTGATCTAAAATGTTAGAGTCACTCTATATTTAAGAGAAC
TATCAGAAGATTGTTTTAAAATATATAACCCCCCTCCCCTTTTTTTTTTT
TTTTTTTCCTTCCAGGCCACCGCCTCTTCGATCCCACTGTTCCTGTGGCA
CTGTTCCTTTGGTTTTTCCACCTCGTGTTAACACCGCCTGCCTTTTTCTC
TTTTTAATTCCCTTTTTTTTTTCCTCTTTCCCCTTTCCCCCTTCCTATCA
CTTTTTCTTCCCCTTTTCTTAAGTCATTTAATCCCCTTCCTTCCCTTTCC
CTTCTTTCGTTTCT

Query= MSMg01no341_n08.b1 MSMg01no341_n08.b1 CHROMAT_FILE:
MSMg01no341_n08.b1 PHD_FILE: MSMg01no341_n08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:11 2005
         (437 letters)



>mm_chr16_44376483_44377319
          Length = 837

 Score =  822 bits (425), Expect = 0.0
 Identities = 431/433 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctgagttgctcttctgcctgggtggtgttagcatcacagctggctcgaaaatatg 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 gaattctgagttgctcttctgcctgggtggtgttagcatcacagctggctcgaaaatatg 578

                                                                       
Query: 65  ggttgggaaattattggccagattcaagttttctgtgggggttggcccctgagatagttt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 ggttgggaaattattggccagattcaagttttctgtgggggttggcccctgagatagttt 518

                                                                       
Query: 125 aacaggcaactcttcctgtgggaattcaaccacttcttcccctctgaacatcaatggcat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 aacaggcaactcttcctgtgggaattcaaccacttcttcccctctgaacatcaatggcat 458

                                                                       
Query: 185 ggagccattactgcttataacaggaccctctgagaaagataagaggacattaacatgaaa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 ggagccattactgcttataacaggaccctctgagaaagataagaggacattaacatgaaa 398

                                                                       
Query: 245 ggaacagaaaggacacatgggcccacacttaaataactccccagacccatgcaaagcgta 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ggaacagaaaggacacatgggcccacacttaaataactccccagacccatgcaaagcgta 338

                                                                       
Query: 305 taaactactaagtcagagagctagaagagacattcaagtgaaaatccagtatttattcta 364
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 337 taaactactaagtcagagagctagaagagacattcaagtgaaaatcctgtatttattcta 278

                                                                       
Query: 365 tgtaattctttatgtgtccgtgtgtgtctgtgtgtgtgtgtacactgcatgcttttataa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 277 tgtaattctttatgtgtccgtgtgtgtctgtgtgtgtgtgtacactgcatgcttttagaa 218

                        
Query: 425 gctcacaaaggct 437
           |||||||||||||
Sbjct: 217 gctcacaaaggct 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space:   354384
Effective search space used:   354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no341_n08.g1 MSMg01no341_n08.g1 CHROMAT_FILE:
MSMg01no341_n08.g1 PHD_FILE: MSMg01no341_n08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:11 2005
         (357 letters)



>mm_chr16_44286286_44287042
          Length = 757

 Score =  690 bits (357), Expect = 0.0
 Identities = 357/357 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   cacattgtggtccagatcatacactggacactaaagcacaggagagacaaaagagagggg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacattgtggtccagatcatacactggacactaaagcacaggagagacaaaagagagggg 260

                                                                       
Query: 61  aacagcattgtcactcagtgttcttccacaggcaggtgtcaactctatgccacctgcatc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacagcattgtcactcagtgttcttccacaggcaggtgtcaactctatgccacctgcatc 320

                                                                       
Query: 121 acaggccagaggaatcagattaatctagacactgtggaaactattctgcagaacagtcat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaggccagaggaatcagattaatctagacactgtggaaactattctgcagaacagtcat 380

                                                                       
Query: 181 gaaatggccctcttaaaacttgggctttgcatggcagggtggcatacacctttaatgcca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaatggccctcttaaaacttgggctttgcatggcagggtggcatacacctttaatgcca 440

                                                                       
Query: 241 gcactcaggacacagaggcagggggatctctgagttcgagcccagcctggtctacagagt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcactcaggacacagaggcagggggatctctgagttcgagcccagcctggtctacagagt 500

                                                                    
Query: 301 aagttctaggacagccagggctacacagagaaactccatctcaaaaaccaaccaaac 357
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagttctaggacagccagggctacacagagaaactccatctcaaaaaccaaccaaac 557


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 357
Length of database: 757
Length adjustment: 9
Effective length of query: 348
Effective length of database: 748
Effective search space:   260304
Effective search space used:   260304
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)