Query= MSMg01no342_a13.b1 MSMg01no342_a13.b1 CHROMAT_FILE:
MSMg01no342_a13.b1 PHD_FILE: MSMg01no342_a13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:26 2005
(244 letters)
>mm_chr16_29646011_29646654
Length = 644
Score = 472 bits (244), Expect = e-138
Identities = 244/244 (100%)
Strand = Plus / Plus
Query: 1 aatccagatatttaagagaaatggtagtttgctttacagctaggcatgctttttaccaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatccagatatttaagagaaatggtagtttgctttacagctaggcatgctttttaccaga 260
Query: 61 atatatcctatttcacataaaaggtgacttttcaatagacttgctcttttcatttggcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atatatcctatttcacataaaaggtgacttttcaatagacttgctcttttcatttggcat 320
Query: 121 gtgtcagcagacctctatgtgtttctaaatcagaggagggtaagcagggctcatccttag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgtcagcagacctctatgtgtttctaaatcagaggagggtaagcagggctcatccttag 380
Query: 181 cattgatgcctacaggactgaaggtcaagtttgaaatcacttcaaaaaagtagacatttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cattgatgcctacaggactgaaggtcaagtttgaaatcacttcaaaaaagtagacatttc 440
Query: 241 ctca 244
||||
Sbjct: 441 ctca 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no342_a13.g1 MSMg01no342_a13.g1 CHROMAT_FILE:
MSMg01no342_a13.g1 PHD_FILE: MSMg01no342_a13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:27 2005
(451 letters)
>mm_chr16_29838318_29839167
Length = 850
Score = 752 bits (389), Expect = 0.0
Identities = 444/481 (92%), Gaps = 30/481 (6%)
Strand = Plus / Minus
Query: 1 ggctggtgagatggctcagcaggtaagagcactgactgctcttccgaaggtcctgagttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 ggctggtgagatggctcagcaggtaagagcactgactgctcttccgaaggtcctgagttc 591
Query: 61 aaatcccagcaaccacatggtggctcacagccatccataatgagatctgacgccctcttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 aaatcccagcaaccacatggtggctcacagccatccataatgagatctgacgccctcttc 531
Query: 121 tggtgtgtctcaagacagctacagtgtacttacaaataatgataaataaatctttgggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 tggtgtgtctcaagacagctacagtgtacttacaaataatgataaataaatctttgggct 471
Query: 181 ggaatgagcagggctggagccagctgggccaaagcgagtagaggtcctgagttcacaaac 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 470 ggaatgagcagggctggagccagctgggtcaaagcgagtagaggtcctgagttcacaaac 411
Query: 241 atctgtacagctacagtgtactcatatacat----------------------------t 272
||||||||||||||||||||||||||||||| |
Sbjct: 410 atctgtacagctacagtgtactcatatacataaaataaataaataaataaataaatcttt 351
Query: 273 aaaaaaaaa--gttcaaagtcattggagaccttgtctcaaaagaaaaaagtggaacggaa 330
||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 350 aaaaaaaaaaagttcaaagtcgttggagaccttgtctcaaaacaaaaaagtggaacggaa 291
Query: 331 gcaaaagagtcacacgaggttcggtccgctttccccagactaggagatctagattctttt 390
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gcaaaagagtcacgcgaggctcggtccgctttccccagactaggagatctagattctttt 231
Query: 391 cttgtatatcttcctttgtgtaatgtattattacaggggcccattagtccccctatgagc 450
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 230 cttgtatatcttcctttgtgtaatgtattattacaagtgcccattagtccccctatgagc 171
Query: 451 a 451
|
Sbjct: 170 a 170
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 850
Length adjustment: 10
Effective length of query: 441
Effective length of database: 840
Effective search space: 370440
Effective search space used: 370440
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
