Query= MSMg01no342_f11.b1 MSMg01no342_f11.b1 CHROMAT_FILE:
MSMg01no342_f11.b1 PHD_FILE: MSMg01no342_f11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:50 2005
(457 letters)
>mm_chr16_41060777_41061634
Length = 858
Score = 685 bits (354), Expect = 0.0
Identities = 417/442 (94%), Gaps = 8/442 (1%)
Strand = Plus / Minus
Query: 5 gaattcaagaatgtcgtgtcctgtcctttatcctttaatcatttagagtagaaatttaaa 64
||||||| |||||| || |||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 858 gaattcaggaatgtggtatcctgtcccttatcctttaattatttagagtagaaatttaaa 799
Query: 65 tagtaaacagcatacattttctctttgtcatttacattttcttcatttttctaggttttg 124
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 798 tagtaaacagcatacattttctctttgtcatttacattttcctcatttttctaggttttg 739
Query: 125 ttttgcatgcaggggtcacttgttctgtagatgaaatataaataaaatgacagggtatta 184
||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 738 ttttgcatgcaagggtcacttgttctgtagatgaaatagaaataaaatgacagggtatta 679
Query: 185 tataccatccactgtcacattccaagttccttactagcaagatatttgctgaggactgct 244
||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 678 tataccatctactgtcacattccaagttcctta-------gatatttgctgaggattgct 626
Query: 245 tcatagttcaatacaaagaaataccctatacttatcaactaatattactactcactatta 304
||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 625 tcatagtacaatacaaagaaataccctatacttatcaactaatattactgctcactattt 566
Query: 305 aaacttagagaatcaaaagttttaggcatttatcccaactaaatcaacaaccttgaatat 364
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 565 aaacttagagaatcaaaagttttaggcatttatcccaacttaaccaacaaccttgaatat 506
Query: 365 tagacttatagcactctaa-ttatgtggggcatcctgagccaacatgcttagagaccaag 423
||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 505 taggcttatagcactctaacttatgtgggacatcctgagccaacatgcttagagaccaag 446
Query: 424 agaattattcccttattatata 445
||||||||||||||||||||||
Sbjct: 445 agaattattcccttattatata 424
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 858
Length adjustment: 10
Effective length of query: 447
Effective length of database: 848
Effective search space: 379056
Effective search space used: 379056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no342_f11.g1 MSMg01no342_f11.g1 CHROMAT_FILE:
MSMg01no342_f11.g1 PHD_FILE: MSMg01no342_f11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:50 2005
(422 letters)
>mm_chr16_40854862_40855683
Length = 822
Score = 754 bits (390), Expect = 0.0
Identities = 414/422 (98%)
Strand = Plus / Plus
Query: 1 tgttctatagacactgtgtcctctagcataggggagaataaaggggtgcccatggctcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgttctatagacactgtgtcctctagcataggggagaataaaggggtgcccatggctcag 260
Query: 61 cggttttctgaaaggagcaagtgtgtacccatcactgaaatcctgtgggaagtcgaggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cggttttctgaaaggagcaagtgtgtacccatcactgaaatcctgtgggaagtcgaggag 320
Query: 121 ctttataaccccagaaggccatcatcattttcaccaaaggagctccccaggtgtggccaa 180
||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 321 ctttataaccccagaaggccatcatcattttaaccaaaggagcttcccaggtgtggccaa 380
Query: 181 gggtgcttatttcttttacacttttatcctaaagcagttttattaaaatgtaattagcct 240
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 381 gggtgcttatttcttttacacttttatcctaaatcagttttattaaaatgtcattagcct 440
Query: 241 aaagcaaactgtacactttaaaagtgagcaaagtgtactcgttttaattatcctaggaaa 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaacaaactgtacactttaaaagtgagcaaagtgtactcgttttaattatcctaggaaa 500
Query: 301 atcaggttaataaatgtcaccatcatctgaacagttttccttctcattttttaatttcgt 360
||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 501 atcaggttaataaatgtcaccatcacctgaacaggtttccttctcattttttaatttcgt 560
Query: 361 tttttcctttctttttctttctccaacttctagaaaccccctggcatattttctcttagt 420
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttttcctttctttttcattctccaacttctagaaaccccctggcatattttctcttagt 620
Query: 421 gt 422
||
Sbjct: 621 gt 622
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space: 335769
Effective search space used: 335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
