Query= MSMg01no345_f10.b1 MSMg01no345_f10.b1 CHROMAT_FILE:
MSMg01no345_f10.b1 PHD_FILE: MSMg01no345_f10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:46 2005
(476 letters)
>mm_chr16_5990561_5991436
Length = 876
Score = 913 bits (472), Expect = 0.0
Identities = 472/472 (100%)
Strand = Plus / Minus
Query: 5 gaattccccacctatgcaccaaaccacttggccacttgattatgcgctcattaactgttt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 gaattccccacctatgcaccaaaccacttggccacttgattatgcgctcattaactgttt 750
Query: 65 tctcactactcagtcattctttgattcaagcacacactcattcatttgttcactcaccca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 tctcactactcagtcattctttgattcaagcacacactcattcatttgttcactcaccca 690
Query: 125 catgttcattcatcttcttgctgcctaagaaatgagtgggtttttttcctccatacacag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 catgttcattcatcttcttgctgcctaagaaatgagtgggtttttttcctccatacacag 630
Query: 185 ggttgttagggttaacactaatacacctgacatatctggaggacccttgagtgttaagca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 ggttgttagggttaacactaatacacctgacatatctggaggacccttgagtgttaagca 570
Query: 245 aacggggttgaaaagcacagaaacaggaagacataaaaattgatgtaagagatggctgaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 aacggggttgaaaagcacagaaacaggaagacataaaaattgatgtaagagatggctgaa 510
Query: 305 gatggagaaggagcagagcacctgcctaacaagcaggagcccctgagcttctaccctcag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gatggagaaggagcagagcacctgcctaacaagcaggagcccctgagcttctaccctcag 450
Query: 365 taatgctgaataaagtaaatagtgacagaaatatattgtagagcatgggacactcaagaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 taatgctgaataaagtaaatagtgacagaaatatattgtagagcatgggacactcaagaa 390
Query: 425 aacaggctgactgcagaggggagagggagccttacatgtgagtgtggtcgga 476
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 aacaggctgactgcagaggggagagggagccttacatgtgagtgtggtcgga 338
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no345_f10.g1 MSMg01no345_f10.g1 CHROMAT_FILE:
MSMg01no345_f10.g1 PHD_FILE: MSMg01no345_f10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:46 2005
(436 letters)
>mm_chr16_5802070_5802905
Length = 836
Score = 843 bits (436), Expect = 0.0
Identities = 436/436 (100%)
Strand = Plus / Plus
Query: 1 tgggtgagaggctgagatggcaatctgcttattccacatcataagtgttttcatctaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgggtgagaggctgagatggcaatctgcttattccacatcataagtgttttcatctaagt 260
Query: 61 aggtgaggggcatactgatgatggctgatgagagaacgtgtatttatttccaggaaccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggtgaggggcatactgatgatggctgatgagagaacgtgtatttatttccaggaaccct 320
Query: 121 gcttcacatagagtgagtacacaaaagcatccatagtggtaagagttcatttcagttgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcttcacatagagtgagtacacaaaagcatccatagtggtaagagttcatttcagttgtt 380
Query: 181 tcctggacttggaattgcctaggagacacatctctgggcatgtctaggagggtgtttcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcctggacttggaattgcctaggagacacatctctgggcatgtctaggagggtgtttcta 440
Query: 241 tagaggtttagctaaggtgatgagacttaccttgaatgtgagaagaatcataccatagac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagaggtttagctaaggtgatgagacttaccttgaatgtgagaagaatcataccatagac 500
Query: 301 tgaggtcccagactcaatcaatgagtaaaagggagaagccagttgagattcagcagttct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgaggtcccagactcaatcaatgagtaaaagggagaagccagttgagattcagcagttct 560
Query: 361 cgcttggcttcctgactggatgcagagtgactagctgcctcaagctcttgatgccatcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cgcttggcttcctgactggatgcagagtgactagctgcctcaagctcttgatgccatcct 620
Query: 421 cttccacccacagtgg 436
||||||||||||||||
Sbjct: 621 cttccacccacagtgg 636
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 836
Length adjustment: 9
Effective length of query: 427
Effective length of database: 827
Effective search space: 353129
Effective search space used: 353129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
