Query= MSMg01no346_b05.b1 MSMg01no346_b05.b1 CHROMAT_FILE:
MSMg01no346_b05.b1 PHD_FILE: MSMg01no346_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:40 2005
(388 letters)
>mm_chr16_90775223_90776011
Length = 789
Score = 629 bits (325), Expect = 0.0
Identities = 363/385 (94%), Gaps = 16/385 (4%)
Strand = Plus / Minus
Query: 5 gaattcacctgttccagaaatcatttctt-gggggccttgaaagtggagacagggttggc 63
||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 520 gaattcacctgggccagaactcatttcttggggggccttgaaagtggagacagggttggc 461
Query: 64 ttcagtacatagttgtgcgttagtttctgtccaacctccccaaggacattgtctaacttt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ttcagtacatagttgtgcgttagtttctgtccaacctccccaaggacattgtctaacttt 401
Query: 124 gatcactctgccccaattgttaggatagaaccatccctccaccaggtctgttcagtagag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gatcactctgccccaattgttaggatagaaccatccctccaccaggtctgttcagtagag 341
Query: 184 caaagccaccagcgaggcactgacaggcggcaggtgacctgctattactcccttgttgtt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 caaagccaccagcgaggcactgacaggcggcaggtgacctgctattactcccttgttgtt 281
Query: 244 tctgcatggccatctcctccgttgaatgacagggaaggcagttttgctgtgttatgtctg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tctgcatggccatctcctccgttgaatgacagggaaggcagttttgctgtgttatgtctg 221
Query: 304 agctgctggggaatgacttgctggggaatgatgactaggctggcatacactgtcccccag 363
||| |||||||||||||||||||||| |||| ||||||||||| ||
Sbjct: 220 agc---------------tgctggggaatgatgactaggcgggcacacactgtcccctag 176
Query: 364 gctggttgtcattgttgtgcaggga 388
|||||||||||||||||||||||||
Sbjct: 175 gctggttgtcattgttgtgcaggga 151
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 789
Length adjustment: 9
Effective length of query: 379
Effective length of database: 780
Effective search space: 295620
Effective search space used: 295620
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no346_b05.g1 MSMg01no346_b05.g1 CHROMAT_FILE:
MSMg01no346_b05.g1 PHD_FILE: MSMg01no346_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:40 2005
(421 letters)
>mm_chr16_90642066_90642886
Length = 821
Score = 799 bits (413), Expect = 0.0
Identities = 419/421 (99%)
Strand = Plus / Plus
Query: 1 ttgatactttcttgctcgattttgctataagcctaaaacttctttaagatttaagtcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgatactttcttgctcgattttgctataagcctaaaacttctttaagatttaagtcatt 260
Query: 61 aataataaatgccagcaaacttttacttgcggctaagtaacttagcaggtcagtgctccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aataataaatgccagcaaacttttacttgcggctaagtaacttagcaggtcagtgctccc 320
Query: 121 ccaaaaataaacactaaaaaagatgtgcttcccaaaaaaaaaaaaaaatcacctgcttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccaaaaataaacactaaaaaagatgtgcttcccaaaaaaaaaaaaaaatcacctgcttga 380
Query: 181 agatgtgcagggctttgaaggagctttgaaggctggcgggacttgagccagctgacccca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agatgtgcagggctttgaaggagctttgaaggctggcgggacttgagccagctgacccca 440
Query: 241 aaaggaagaaccccggatttcacgtgataaccctttctcgaagcattcaaagtcttttca 300
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 441 aaaggaagaaccccggatttcacgtgataccccttcctcgaagcattcaaagtcttttca 500
Query: 301 tgaggctgaagaagccgcagagctttttaaagcacagcagtctgtgtgagacaaaagctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgaggctgaagaagccgcagagctttttaaagcacagcagtctgtgtgagacaaaagctg 560
Query: 361 gggggttttgtggacacagagcagacaggtcttgaggagcgggattcatttagcaccagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gggggttttgtggacacagagcagacaggtcttgaggagcgggattcatttagcaccagt 620
Query: 421 c 421
|
Sbjct: 621 c 621
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 821
Length adjustment: 9
Effective length of query: 412
Effective length of database: 812
Effective search space: 334544
Effective search space used: 334544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
