Query= MSMg01no347_l01.b1 MSMg01no347_l01.b1 CHROMAT_FILE:
MSMg01no347_l01.b1 PHD_FILE: MSMg01no347_l01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:44 2005
(453 letters)
>mm_chr16_31311148_31311996
Length = 849
Score = 787 bits (407), Expect = 0.0
Identities = 438/451 (97%), Gaps = 6/451 (1%)
Strand = Plus / Plus
Query: 4 ggaattctcctct-caccgaggagctgcatccggcagccgctgccagcctggctgcccag 62
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcctcagcaccgaggagctgcatccggcagccgctgccagcctggctgcccag 263
Query: 63 cagccgtaaggccatggcctcagagccttgatacctcttttcaagcatctcttgttggat 122
|||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cagctgtaaggccatcgcctcagagccttgatacctcttttcaagcatctcttgttggat 323
Query: 123 tagcttccttcatagatccaccccctcccctgccccattgcatatttctccagggtggga 182
||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 324 tagcttccttcatggatccaccccctcccctgccccattgcatatttctccagagtggga 383
Query: 183 atcctgtctgattctcctcagaaccatcccttggaaatgtcaggctcaggagagactggt 242
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 384 atcctgtctgattctcctcagaaccatcccttggaaatgccaggctcaggagagactggt 443
Query: 243 ttctggaataaaagtagtctgtatgtggggaataggcaaagaggggcactgaaaagtcaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttctggaataaaagtagtctgtatgtggggaataggcaaagaggggcactgaaaagtcaa 503
Query: 303 aaggttcgtgaatggaaaaatggtgtccatcagggaaggctccccagagcctcacatttt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaggttcgtgaatggaaaaatggtgtccatcagggaaggctccccagagcctcacatttt 563
Query: 363 atcctcgccattgtcttactgggctgtccgccattgtcttattgggctgtcaggccaagc 422
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 564 atccttgccattgtcttactgggctgtccgccattgtcttattg-----tcaggccaagc 618
Query: 423 caagcagcataaggtggggtgggggaggagg 453
|||||||||||||||||||||||||||||||
Sbjct: 619 caagcagcataaggtggggtgggggaggagg 649
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 849
Length adjustment: 10
Effective length of query: 443
Effective length of database: 839
Effective search space: 371677
Effective search space used: 371677
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no347_l01.g1 MSMg01no347_l01.g1 CHROMAT_FILE:
MSMg01no347_l01.g1 PHD_FILE: MSMg01no347_l01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:45 2005
(168 letters)
>mm_chr16_32927005_32927572
Length = 568
Score = 263 bits (136), Expect = 4e-75
Identities = 160/168 (95%), Gaps = 4/168 (2%)
Strand = Plus / Plus
Query: 1 catcagcgagcaaaggaatggaaaacaggaaagacgctcgagcaccacttaaagagctga 60
|||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 catcagcgagcaaagggatggaaaacaggaaagattctcgagcaccacttaaagagctga 260
Query: 61 gaccaccgtgtagcacaaagcctgtgaagagcggggaagcccatgcacggctgtgggggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 gaccaccgtgtagcacaaagcctgtgaagagcggggaagcccatgcacggctgtgggagt 320
Query: 121 gggagtgggagttggtacactgactg-anagcana-tttggcattatc 166
|||||||||||||||||||||||||| | |||| | ||||||||||||
Sbjct: 321 gggagtgggagttggtacactgactgga-agca-agtttggcattatc 366
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 168
Length of database: 568
Length adjustment: 8
Effective length of query: 160
Effective length of database: 560
Effective search space: 89600
Effective search space used: 89600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
