Query= MSMg01no347_o24.b1 MSMg01no347_o24.b1 CHROMAT_FILE:
MSMg01no347_o24.b1 PHD_FILE: MSMg01no347_o24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:04 2005
(363 letters)
>mm_chr16_40369782_40370543
Length = 762
Score = 663 bits (343), Expect = 0.0
Identities = 355/359 (98%), Gaps = 1/359 (0%)
Strand = Plus / Minus
Query: 5 gaattcagaattgattcgcatttatttttgacatggccagcatggcacagctggagatga 64
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gaattcagaattga-acggatttatttttgacatggccagcatggcacagctggagatga 504
Query: 65 cgcagatgctgagttaagtgtagcattatgagtccccagacctaatatcttcttaataaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 cgcagatgctgagttaagtgtagcattatgagtccccagacctaatatcttcttaataaa 444
Query: 125 gagcattgttttgctgtggacataaaggaaattgtgtttgtatgtgctcagaatgcggtc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gagcattgttttgctgtggacataaaggaaattgtgtttgtatgtgctcagaatgcggtc 384
Query: 185 ctgagtctattaagttaagatgtggactgaggagaaacctagttaggtgtgtgcaggtat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 383 ctgagtctattaagttaagatgtggactgaggagaaacctagttaggtgtgtgcacgtat 324
Query: 245 tactccaactttttcacacctgcacagtcaatgtgctctagggctgagaaactaacaaag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tactccaactttttcacacctgcacagtcaatgtgctctagggctgagaaactaacaaag 264
Query: 305 gaggtgtgggtgactctaacaggcttagtgcgagtaacatcaaaccacaaggagcagag 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gaggtgtgggtgactctaacaggcttagtgcgagtaacatcaaaccacaaggagcagag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 363
Length of database: 762
Length adjustment: 9
Effective length of query: 354
Effective length of database: 753
Effective search space: 266562
Effective search space used: 266562
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no347_o24.g1 MSMg01no347_o24.g1 CHROMAT_FILE:
MSMg01no347_o24.g1 PHD_FILE: MSMg01no347_o24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:04 2005
(153 letters)
>mm_chr16_40161757_40162309
Length = 553
Score = 275 bits (142), Expect = 1e-78
Identities = 145/146 (99%)
Strand = Plus / Plus
Query: 1 atatttatcactttaatacttggccaacattccctgatagctatgcctcctctactttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atatttatcactttaatacttggccaacattccctgatagctatgcctcctctactttaa 260
Query: 61 tatttttcttttcttcaatgagattagatttcattttttagtgtatacacacacacacac 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatttttcttttcttcactgagattagatttcattttttagtgtatacacacacacacac 320
Query: 121 acacacacacacacacacacacacac 146
||||||||||||||||||||||||||
Sbjct: 321 acacacacacacacacacacacacac 346
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 1
Length of query: 153
Length of database: 553
Length adjustment: 8
Effective length of query: 145
Effective length of database: 545
Effective search space: 79025
Effective search space used: 79025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
