Query= MSMg01no352_i13.b1 MSMg01no352_i13.b1 CHROMAT_FILE:
MSMg01no352_i13.b1 PHD_FILE: MSMg01no352_i13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:07 2005
(514 letters)
>mm_chr16_5174306_5175219
Length = 914
Score = 922 bits (477), Expect = 0.0
Identities = 505/519 (97%), Gaps = 8/519 (1%)
Strand = Plus / Plus
Query: 4 ggaattcactttgtccaccaggctggccttgagctcagaaatcctcctgcctctgcctcc 63
|||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 ggaactcactttgtagaccaggctggccttgagctcagaaatcctcctgcctctgcctcc 255
Query: 64 caagtgctgggattaaaggcatgcaccaccatgctactcagtgtggtgcctagtagctca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 caagtgctgggattaaaggcatgcaccaccatgctactcagtgtggtgcctagtagctca 315
Query: 124 ggcctgacatcccaactccttgagaggttggggcaggaggatgcaagtttaatgcctatg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ggcctgacatcccaactccttgagaggttggggcaggaggatgcaagtttaatgcctatg 375
Query: 184 ctggccagggagtgagttcaggtatggcctggga--------gacacagactgaaaagaa 235
|||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 376 ctggccagggagtgagttcaggtatggcctgggaacttttgagacacagactgaaaagaa 435
Query: 236 agttggagaatggctctgtggtaggtcacctgccctgtgaagccctggattctaagcctt 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 agttggagaatggctctgtggtaggtcacctgccctgtgaagccctggattctaagcctt 495
Query: 296 agtgccttgagaggggcacaaacagaagagaatagctggatctgcagggctgaagtactg 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 agtgccttgagaggggcacaaacagaagagaatagctggatctgcagggctgaagtactg 555
Query: 356 gtccctgtgtgcagggtcttccatagaggacatgtgtgcccagtaagtttcatccactga 415
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 gtccctgtgtgcaggaccttccatagaggacatgtgtgcccagtaagtttcatccactga 615
Query: 416 tttacagtcctctggctttgagatcaagattggtgagtccacagtctctactatatactg 475
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 616 tttacagtcctctggctttgagatcaagattggtgagtccacagtctctattatatactg 675
Query: 476 tccttaggtaggaatgcagcaagcaaggccatctgctga 514
|||||||||||||||||||||||||||||||||||||||
Sbjct: 676 tccttaggtaggaatgcagcaagcaaggccatctgctga 714
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space: 455616
Effective search space used: 455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no352_i13.g1 MSMg01no352_i13.g1 CHROMAT_FILE:
MSMg01no352_i13.g1 PHD_FILE: MSMg01no352_i13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:07 2005
(396 letters)
>mm_chr16_5334419_5335214
Length = 796
Score = 565 bits (292), Expect = e-165
Identities = 304/308 (98%)
Strand = Plus / Minus
Query: 86 ctctgtgttagctgggaccctcctctgggtaccgccctcatcctccagctctctgatgaa 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ctctgtgttagctgggaccctcctctgggtaccgccctcatcctccagctctctgatgaa 331
Query: 146 ttctcccaaagagatgttattttctccgtgactctagctgctggttatgattcatgtgtg 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ttctcccaaagagatgttattttctccgtgactctagctgctggttatgattcatgtgtg 271
Query: 206 tgtttaagagtttagttcttgtcttccctgccagtccgcgagctccgcgaagggagcaac 265
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tgtttaagagtttagttcctgtcttccctgccagtccgcgagctccgcgaagggagcaac 211
Query: 266 tgcatttgatttattcagcactgtgtcccaggactgagaatgtctggtgaaggcagcgct 325
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 210 tgcatttgatttattcagcactgtgtcccaggactgagaatgtctggcgaaggcagcact 151
Query: 326 gtgacagtttgaatgtgaatgtgtcaggtgcttggttgacagcctgttgggctattttga 385
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 150 gtgacagtttgaatgtgaatgtgtcgggtgcttggttgacagcctgttgggctattttga 91
Query: 386 gaggttgg 393
||||||||
Sbjct: 90 gaggttgg 83
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 396
Length of database: 796
Length adjustment: 9
Effective length of query: 387
Effective length of database: 787
Effective search space: 304569
Effective search space used: 304569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
