TTTTTTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCCACAAACTTTAGCTACTTGGTGTATTTTTTTTAACAAAA
AATAATTTCCTTACACTATCTCCTACCATATTTTTCTTTCCTGAAAACCC
ATAAGGATAATAAAGAATCCAGAACTTGCTACATATATGACTGATATCAG
AGCCTAACACCAATACTTGGCTCTGAATGTCTCTGCCCCAAATCTGTGTG
ACTTGGCCAATTAACTACCTCCCTAAAATTGTTCTCTCCCTGGCTTATGA
TCAAGTGATTTTTTTTTTTTATAAAAAGGAGAAAACTTTTTTCTCATGCA
ATCCCATAGCCCTCCCTCTAAATTCTCACTGCAGTTTTACATTTGCATTT
TCTGTAGAATAACTGTGGGGTCAGAGGGATGCACGTTCATTATTTTAGGG
GGAAATCATTCTTTTAACTCTAAGAATCTAACTTCATTATTTCCCAAAAT
AGACAGAATCTACAATGTAACAGTATGTTTCCTGTCAGGAATTTAGCCTT
AGATGAAAACCATAGAAGGAGAAAGCTCCCATATAATAGACTTTGCTTTA
TGTGCATAACACACCCCATATTTTCCAGGTTTTAGGCAGCAAATCCCTCT
AGTCCTCCTGGTCTTACAAGTATTTGTTGAAAAAGAAGTACTCATAACTT
CTGTGAATGAACTCTTTACAATGGGTAAAGCAAGGTGGAAATCTTTCAGT
TTGG

TTTTCCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAAGACTTT
TATCGTGAATGGGTGTTGGATTTTGTCAAATGCTTTCTCAGCATCTAATG
AAATGATGATGTGTTTTTTTCCTTTGAAATTTTTTATATAGTAGATTACA
TTGATGGATTTCCATATACTGAACCATCCCTGAAGCCCTGGGATGAAGCC
TACTTGATCATGATGGATGATTATTTTGATGTGTTCTTGGATTTGGTTTG
CACGGATTTTATTGAGCATTTTTGCATCCATATTCATAAGGGAAATTGGC
CTGAATCTCTCTTTCTTCATCGTTTCTTTGTGTGGTTTACTCTTCATACT
ACTTGTCGTTTCTTATAATGACCTGCATCACACGCTCTCCCCTTTTTAAT
TCGTGTATCCCATTTATCTCAATCCTTCCTTCTTACCCCTTCTCTATTCC
TCTTCCTTTCCTCTCCCCTCCCTTTCCTTTTCCTTCCTTCCTTTTTTTTT
TTTTTTAATCCCTCTTCCCCTCCATTTTTTCCCCTTCTTCACTTCCCTTT
TTCCCCCTTTTTTTTTCCCTTTTTTCTTCCCCCCTTTTATCCCCTTTTTC
CTTTTCTTTCCCCTCTTTTCCCCATTCTTATCCTCTTTATTTCCTTCTTT
CATCCCCTTCTTCCCCTCTTTTTCCCTTTTTCTTTTTTTTCCCCCTTTCC
CCTTTCTTTATTCTTTTTTTTTTCCCCCCTATTTC

Query= MSMg01no353_l01.b1 MSMg01no353_l01.b1 CHROMAT_FILE:
MSMg01no353_l01.b1 PHD_FILE: MSMg01no353_l01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:38 2005
         (458 letters)



>mm_chr16_42541025_42541881
          Length = 857

 Score =  832 bits (430), Expect = 0.0
 Identities = 448/454 (98%), Gaps = 1/454 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccacaaactttagctacttggtgtattttttttaacaaaaaataatttccttaca 64
           |||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 205 gaattccacaaacaatagctacttggtgtattttttt-aacaaaaaataatttccttaca 263

                                                                       
Query: 65  ctatctcctaccatatttttctttcctgaaaacccataaggataataaagaatccagaac 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctatctcctaccatatttttctttcctgaaaacccataaggataataaagaatccagaac 323

                                                                       
Query: 125 ttgctacatatatgactgatatcagagcctaacaccaatacttggctctgaatgtctctg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttgctacatatatgactgatatcagagcctaacaccaatacttggctctgaatgtctctg 383

                                                                       
Query: 185 ccccaaatctgtgtgacttggccaattaactacctccctaaaattgttctctccctggct 244
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 384 ccccaaatctgtgtgacttggccaattaactacctccctaaaattgttctctccctagct 443

                                                                       
Query: 245 tatgatcaagtgattttttttttttataaaaaggagaaaacttttttctcatgcaatccc 304
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 444 tatgatcaagtgattttttttttatataaaaaggagaaaacttttttctcatgcaatccc 503

                                                                       
Query: 305 atagccctccctctaaattctcactgcagttttacatttgcattttctgtagaataactg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 atagccctccctctaaattctcactgcagttttacatttgcattttctgtagaataactg 563

                                                                       
Query: 365 tggggtcagagggatgcacgttcattattttagggggaaatcattcttttaactctaaga 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tggggtcagagggatgcacgttcattattttagggggaaatcattcttttaactctaaga 623

                                             
Query: 425 atctaacttcattatttcccaaaatagacagaat 458
           |||||||||||| |||||||||||||||||||||
Sbjct: 624 atctaacttcataatttcccaaaatagacagaat 657


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 857
Length adjustment: 10
Effective length of query: 448
Effective length of database: 847
Effective search space:   379456
Effective search space used:   379456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)