Query= MSMg01no358_a11.b1 MSMg01no358_a11.b1 CHROMAT_FILE:
MSMg01no358_a11.b1 PHD_FILE: MSMg01no358_a11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:12 2005
(502 letters)
>mm_chr16_40973327_40974225
Length = 899
Score = 659 bits (341), Expect = 0.0
Identities = 424/497 (85%), Gaps = 71/497 (14%)
Strand = Plus / Minus
Query: 5 gaattcattgcttgtgagtacacgtaagccttaggggcaggcactgaaggcttttttttt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gaattcattgcttgtgagtacacgtaagccttaggggcaggcactgaaggcttttttttt 367
Query: 65 tttttaaattggttgaggctgttggggtataattacaacttttttttttttttaaatcaa 124
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 366 tttttaaattggttgaggctgctggggtataattacaac---tttttttttttaaatcaa 310
Query: 125 agaaagcctactaccaaagtgctacaaaaggcagaatttaatggagtttacagtatctat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 agaaagcctactaccaaagtgctacaaaaggcagaatttaatggagtttacagtatctat 250
Query: 185 aaaaattgattacacttatacatgcgtgttttgagcctaagtgatcacacacacacacac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 aaaaattgattacacttatacatgcgtgttttgagcctaagtgatcacacacacacacac 190
Query: 245 acacacacacacacacacacacatacacacacacacacacacacacacacacacatacac 304
||||||||||||||||||||||||
Sbjct: 189 acacacacacacacacacacacat------------------------------------ 166
Query: 305 acacacacacacacacacacacacacatacacacacacacacacacacacacacacacac 364
||||||||||||||||||||||||||||||
Sbjct: 165 ------------------------------acacacacacacacacacacacacacacac 136
Query: 365 acatacacacacacacacacaccacacaccacacccctagacggaatcaaatgtctatac 424
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 135 acatacacacacacacacacac--cacaccacacccctagacggaatcaaatgtctatac 78
Query: 425 tggtatactagaaacatgtgtagctgcatctctaaaagtctgtaaacatcacttgaataa 484
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 77 tggtatactagaaacatgtgtagctgcatctctaagagtctgtaaacatcacttgaataa 18
Query: 485 ttcagtgctatatgaga 501
|||||||||||||||||
Sbjct: 17 ttcagtgctatatgaga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 201
Number of extensions: 45
Number of successful extensions: 45
Number of sequences better than 10.0: 1
Number of HSP's gapped: 35
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 899
Length adjustment: 10
Effective length of query: 492
Effective length of database: 889
Effective search space: 437388
Effective search space used: 437388
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no358_a11.g1 MSMg01no358_a11.g1 CHROMAT_FILE:
MSMg01no358_a11.g1 PHD_FILE: MSMg01no358_a11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:12 2005
(512 letters)
>mm_chr16_40796447_40797358
Length = 912
Score = 975 bits (504), Expect = 0.0
Identities = 510/512 (99%)
Strand = Plus / Plus
Query: 1 atgtgtagtagtttccactccttagtttagaaatataaagattgaagaatgttttatata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgtgtagtagtttccactccttagtttagaaatataaagattgaagaatgttttatata 260
Query: 61 tttgtataaaaattaacatactaaaatttgaaatgactgttagctattaactgccttttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttgtataaaaattaacatactaaaatttgaaatgactgttagctattaactgccttttt 320
Query: 121 aaatatgagtaaaaattagccctacactgcataggaagaggaaagtttagagaaaatgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaatatgagtaaaaattagccctacactgcataggaagaggaaagtttagagaaaatgct 380
Query: 181 gtcaataacagaactccaaagagcaaggtaggagaagattaaggaaaaaaatccagtgga 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtcaacaacagaactccaaagagcaaggtaggagaagattaaggaaaaaaatccagtgga 440
Query: 241 ggagctagagaaagtactcaaggagctgaaggggtctgcaaccctataggtggaacaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 ggagctagagaaagtactcaaggagctgaaggggtctgcaaccctatagatggaacaaca 500
Query: 301 atatgaactaaccagtatccccagaggtcgtgtctctagctgcatatgtaacagaagatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atatgaactaaccagtatccccagaggtcgtgtctctagctgcatatgtaacagaagatg 560
Query: 361 gcctagttggccatcattgggaagagaggcccttggtctggcaaagattctatgccccag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcctagttggccatcattgggaagagaggcccttggtctggcaaagattctatgccccag 620
Query: 421 tacaggggaacaccagggccaggaagcaggagtgggtgggttcgggagcagggcaggggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tacaggggaacaccagggccaggaagcaggagtgggtgggttcgggagcagggcaggggg 680
Query: 481 gtgtataggggcctttcgggatagcatttgta 512
||||||||||||||||||||||||||||||||
Sbjct: 681 gtgtataggggcctttcgggatagcatttgta 712
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 912
Length adjustment: 10
Effective length of query: 502
Effective length of database: 902
Effective search space: 452804
Effective search space used: 452804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
