Query= MSMg01no358_d22.b1 MSMg01no358_d22.b1 CHROMAT_FILE:
MSMg01no358_d22.b1 PHD_FILE: MSMg01no358_d22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:27 2005
(481 letters)
>mm_chr16_74563055_74563939
Length = 885
Score = 895 bits (463), Expect = 0.0
Identities = 475/481 (98%), Gaps = 4/481 (0%)
Strand = Plus / Plus
Query: 5 gaattctgtttatttgttagtacatttaattgtttaaagagagtttaccaaatgcagaga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtttatttgttagtacatttaattgtttaaagagagtttaccaaatgcagaga 264
Query: 65 atggattaggcatctgggtgacaatgatgcatgagatgtgtctccaagtagttcagcttc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atggattaggcatctgggtgacaatgatgcatgagatgtgtctccaagtagttcagcttc 324
Query: 125 tggtgagagcctgctatctagaacagaaacttcctctggacttagagcgttgaacaatct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tggtgagagcctgctatctagaacagaaacttcctctggacttagagcgttgaacaatct 384
Query: 185 ataaagttaagtgtatctacttaatggatatttgagcataacaggaagtataaacttctg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ataaagttaagtgtatctacttaatggatatttgagcataacaggaagtataaacttctg 444
Query: 245 aacaggtgtttctagataatgtaaggtattatttttttatctccataaaaatggagtatg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aacaggtgtttctagataatgtaaggtattatttttttatctccataaaaatggagtatg 504
Query: 305 taaaatggagtgttaacaaaatgggtttataaaatggagattccagatgccaaataagat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taaaatggagtgttaacaaaatgggtttataaaatggagattccagatgccaaataagat 564
Query: 365 ctaatgcatcaaacttcagaaatagagtgagaacatgcatttttaaaaagatgcctctca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 565 ctaatgcatcaaacttcagaaatagagtgagaacatgcatttttaaaaagatgcctccca 624
Query: 425 ggaggttctaataaataccagctttgtgagta----cacttctgagaaatcatctttcct 480
|||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 625 ggaggttctaataaataccagctttgtgagtaattacacttctgaaaaatcatctttcct 684
Query: 481 g 481
|
Sbjct: 685 g 685
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 885
Length adjustment: 10
Effective length of query: 471
Effective length of database: 875
Effective search space: 412125
Effective search space used: 412125
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no358_d22.g1 MSMg01no358_d22.g1 CHROMAT_FILE:
MSMg01no358_d22.g1 PHD_FILE: MSMg01no358_d22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:27 2005
(447 letters)
>mm_chr16_74724429_74725275
Length = 847
Score = 826 bits (427), Expect = 0.0
Identities = 440/445 (98%), Gaps = 2/445 (0%)
Strand = Plus / Minus
Query: 1 cctatgccacatttgaatttaaagctgtgacctgtgatctcaaattgacttcctgacaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cctatgccacatttgaatttaaagctgtgacctgtgatctcaaattgacttcctgacaat 384
Query: 61 aatgattaggatggcagtgtgaccagcacacatttacttataatctgtatgtagtaaaat 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 383 aatgattaggatggcagtgtgaccagcacacatttacttataatctctatgtagtaaaat 324
Query: 121 caatgacctcccccctctgctgaattgccacttcagttagcgtaaaatagaatttcattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 caatgacctcccccctctgctgaattgccacttcagttagcgtaaaatagaatttcattg 264
Query: 181 atacggttcttttactcacttgatgcttctattgtagatataaatataaattaaacactt 240
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 atacgtttcttttattcacttgatgcttctattgtagatataaatataaattaaacactt 204
Query: 241 tggtaatattttatgtaaaataattattaatattctgtatatattgattaatgctggaaa 300
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 203 tggtaatattttatgtaaaataattattaatattct--atatattgattaatgctggaaa 146
Query: 301 ttaatacagtgacaaatattcctaaaccagttagtttttcaagttatcacacagagatac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 ttaatacagtgacaaatattcctaaaccagttagtttttcaagttatcacacagagatac 86
Query: 361 tttaatagttcaaagcctagaccttagctcagcttactcacaactagctcttctaagtta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 tttaatagttcaaagcctagaccttagctcagcttactcacaactagctcttctaagtta 26
Query: 421 agctgggcacctagccctatccagc 445
|||||||||||||||||||||||||
Sbjct: 25 agctgggcacctagccctatccagc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
