Query= MSMg01no361_i22.b1 MSMg01no361_i22.b1 CHROMAT_FILE:
MSMg01no361_i22.b1 PHD_FILE: MSMg01no361_i22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:38 2005
(491 letters)
>mm_chr16_88427010_88427900
Length = 891
Score = 919 bits (475), Expect = 0.0
Identities = 484/487 (99%)
Strand = Plus / Plus
Query: 5 gaattcagtggtcagggactatcggcaactgaaagcatttaacagtataggataaagact 64
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagtggccagggactatcggcaactgaaagcatttaacagtataggataaagact 264
Query: 65 tagaagagtcccctgtgagtggaatcaggcactgtcagcttcccatggcacatgtgatgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tagaagagtcccctgtgagtggaatcaggcactgtcagcttcccatggcacatgtgatgt 324
Query: 125 ggattccttgtgatgacactgtgatcttcagctctcaagccattgagaacctgaaaagaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggattccttgtgatgacactgtgatcttcagctctcaagccattgagaacctgaaaagaa 384
Query: 185 atgggaccagaaacaatagaggaatggaaatataggagaagggtttaaggatccagagtt 244
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 385 atgggaccagaaacaatagaggaatgaaaatataggagaagggtttaaggatccagagtt 444
Query: 245 ccagggagctgtcttcagggctgagaactgtaacactaatccctgtacaggtaaaaccta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccagggagctgtcttcagggctgagaactgtaacactaatccctgtacaggtaaaaccta 504
Query: 305 caagtcctaatgctagaagtcttcatgtggattataatatgtagaggtaaaggttctgat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 caagtcctaatgctagaagtcttcatgtggattataatatgtagaggtaaaggttctgat 564
Query: 365 aattcagcccagcgaagggactgaagtctttgaggatactccttgatgtcatgtctacta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aattcagcccagcgaagggactgaagtctttgaggatactccttgatgtcatgtctacta 624
Query: 425 caaacctgtcttaccatcagacacacaggggataagaaaatataccagaagccagcattt 484
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 625 caaacctgtcttaccatcagacacacaggggaaaagaaaatataccagaagccagcattt 684
Query: 485 ctttttt 491
|||||||
Sbjct: 685 ctttttt 691
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 891
Length adjustment: 10
Effective length of query: 481
Effective length of database: 881
Effective search space: 423761
Effective search space used: 423761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no361_i22.g1 MSMg01no361_i22.g1 CHROMAT_FILE:
MSMg01no361_i22.g1 PHD_FILE: MSMg01no361_i22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:38 2005
(311 letters)
>mm_chr16_88615283_88615993
Length = 711
Score = 561 bits (290), Expect = e-164
Identities = 309/324 (95%), Gaps = 14/324 (4%)
Strand = Plus / Minus
Query: 2 atacatttctgttgccactttgaatgccac--------------tgtgtgtgtgtgtgtg 47
|||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 592 atacatttctgttgccactttgaatgccactgtgtgtatgtgtgtgtgtgtgtgtgtgtg 533
Query: 48 tgtgtgtgtgtgtgtgtgtgtattcctcctttgctccctcattctttttcagtttctctc 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 tgtgtgtgtgtgtgtgtgtgtattcctcctttgctccctcattctttttcagtttctctc 473
Query: 108 ttcctctgctgaagaagcctatgaccacaccagatttatctcagtgaatctgcttcaata 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ttcctctgctgaagaagcctatgaccacaccagatttatctcagtgaatctgcttcaata 413
Query: 168 gttaatgtatgtgtatctgggatactgcttttacaccatcaggtggtaattataggttcc 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 gttaatgtatgtgtatctgggatactgcttttacaccatcaggtggtaattataggttcc 353
Query: 228 caggggtttagatgtaggacttttggagggcgtatgtaatggatactaatacagtaaata 287
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 352 caggggtttagatgtaggacttttggagggcgtaggtaatggatactaatacagtaaata 293
Query: 288 ttaaatataggtgaatcaaataaa 311
||||||||||||||||||||||||
Sbjct: 292 ttaaatataggtgaatcaaataaa 269
Score = 70.3 bits (36), Expect = 1e-16
Identities = 36/36 (100%)
Strand = Plus / Minus
Query: 33 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 68
||||||||||||||||||||||||||||||||||||
Sbjct: 36 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 1
Score = 68.4 bits (35), Expect = 5e-16
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 32 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 66
|||||||||||||||||||||||||||||||||||
Sbjct: 35 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 72
Number of extensions: 21
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 5
Length of query: 311
Length of database: 711
Length adjustment: 9
Effective length of query: 302
Effective length of database: 702
Effective search space: 212004
Effective search space used: 212004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
