Query= MSMg01no366_e16.b1 MSMg01no366_e16.b1 CHROMAT_FILE:
MSMg01no366_e16.b1 PHD_FILE: MSMg01no366_e16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:06 2005
(437 letters)
>mm_chr16_7455430_7456266
Length = 837
Score = 822 bits (425), Expect = 0.0
Identities = 431/433 (99%)
Strand = Plus / Plus
Query: 5 ggaattcatacagtgtcctaaagtagcttcgtggcatgtgtggttttcagaaatgtgtgc 64
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattcatacagtgttgtaaagtagcttcgtggcatgtgtggttttcagaaatgtgtgc 264
Query: 65 tccctgccacttctgcccgatgcaggccttgtgcaaagtataccctgcccatttcttcaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tccctgccacttctgcccgatgcaggccttgtgcaaagtataccctgcccatttcttcaa 324
Query: 125 ccagaaatggctctttctggatggtgtttcagacaaactagaaagcacttgccatattgc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccagaaatggctctttctggatggtgtttcagacaaactagaaagcacttgccatattgc 384
Query: 185 ttaattgctatgtatgagtgccgctgagcacttcacagtgtagttgggactgtgcaagtc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttaattgctatgtatgagtgccgctgagcacttcacagtgtagttgggactgtgcaagtc 444
Query: 245 acatggaggaagttagtataccaagaaagaggaaagacctggctaagatatactaatcat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acatggaggaagttagtataccaagaaagaggaaagacctggctaagatatactaatcat 504
Query: 305 ttttcatctgaacagatatggtatggttgcaagcaaattttcagcgattgcataggagga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttttcatctgaacagatatggtatggttgcaagcaaattttcagcgattgcataggagga 564
Query: 365 gggaagtgcacatgtaattaaaacatctttttttttttcagttatttaaagaaaaaagca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gggaagtgcacatgtaattaaaacatctttttttttttcagttatttaaagaaaaaagca 624
Query: 425 gacgtgtgttggt 437
|||||||||||||
Sbjct: 625 gacgtgtgttggt 637
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space: 354384
Effective search space used: 354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no366_e16.g1 MSMg01no366_e16.g1 CHROMAT_FILE:
MSMg01no366_e16.g1 PHD_FILE: MSMg01no366_e16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:06 2005
(416 letters)
>mm_chr16_7609005_7609820
Length = 816
Score = 804 bits (416), Expect = 0.0
Identities = 416/416 (100%)
Strand = Plus / Minus
Query: 1 attctccttacccctcccccatttgatagccatcattaattcatgggaaactgattaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 attctccttacccctcccccatttgatagccatcattaattcatgggaaactgattaagc 505
Query: 61 tttttgtaaggctccagcaaacaccttggaaaacaaactcaatttgtaaggacaaaattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tttttgtaaggctccagcaaacaccttggaaaacaaactcaatttgtaaggacaaaattg 445
Query: 121 ttatcctgattatttcaaataaaggaaaacagaaaacacctctggactggttactttcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttatcctgattatttcaaataaaggaaaacagaaaacacctctggactggttactttcag 385
Query: 181 agctgatgcctagcaaaaaaaaccaaccaaccaaccaaacaaacaaaaaagaacaagaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agctgatgcctagcaaaaaaaaccaaccaaccaaccaaacaaacaaaaaagaacaagaat 325
Query: 241 taactcagtggtttctgtattgttgattctgttattagaattaattcccatttcccctgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 taactcagtggtttctgtattgttgattctgttattagaattaattcccatttcccctgt 265
Query: 301 ggctggaattccaaatgccaggtatttaattggttgcattaacatccactcacactagca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggctggaattccaaatgccaggtatttaattggttgcattaacatccactcacactagca 205
Query: 361 tgcttgtattagttgtgtcctcgttgttctgacaagatacctgcagaagtagctta 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tgcttgtattagttgtgtcctcgttgttctgacaagatacctgcagaagtagctta 149
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space: 328449
Effective search space used: 328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
